RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
CPNE1-214ENST00000435747 MT1MQ8N339 61 aa3.7□□□□□ -1.82
CPNE1-214ENST00000435747 MT1LQ93083 61 aa3.65□□□□□ -1.83
CPNE1-214ENST00000435747 A8MU10 97 aa3.64□□□□□ -1.83
CPNE1-214ENST00000435747 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
CPNE1-214ENST00000435747 A0A1B0GU69 56 aa3.62□□□□□ -1.83
CPNE1-214ENST00000435747 C10orf95Q9H7T3 257 aa3.62□□□□□ -1.83
CPNE1-214ENST00000435747 SMIM26A0A096LP01 95 aa3.61□□□□□ -1.83
CPNE1-214ENST00000435747 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
CPNE1-214ENST00000435747 KRTAP4-7Q9BYR0 210 aa3.61□□□□□ -1.83
CPNE1-214ENST00000435747 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
CPNE1-214ENST00000435747 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
CPNE1-214ENST00000435747 ANAPC13Q9BS18 74 aa3.56□□□□□ -1.84
CPNE1-214ENST00000435747 CCDC179H3BU77 68 aa3.55□□□□□ -1.84
CPNE1-214ENST00000435747 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
CPNE1-214ENST00000435747 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
CPNE1-214ENST00000435747 TNP1P09430 55 aa3.54□□□□□ -1.84
CPNE1-214ENST00000435747 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
CPNE1-214ENST00000435747 ATP5EP56381 51 aaPredicted RBP3.49□□□□□ -1.85
CPNE1-214ENST00000435747 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
CPNE1-214ENST00000435747 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CPNE1-214ENST00000435747 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
CPNE1-214ENST00000435747 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
CPNE1-214ENST00000435747 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CPNE1-214ENST00000435747 UQCR11O14957 56 aa3.39□□□□□ -1.87
CPNE1-214ENST00000435747 TMEM258P61165 79 aa3.38□□□□□ -1.87
CPNE1-214ENST00000435747 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
CPNE1-214ENST00000435747 KRTAP25-1Q3LHN0 102 aa3.33□□□□□ -1.88
CPNE1-214ENST00000435747 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
CPNE1-214ENST00000435747 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
CPNE1-214ENST00000435747 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
CPNE1-214ENST00000435747 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
CPNE1-214ENST00000435747 Q1T7F1 81 aa3.22□□□□□ -1.89
CPNE1-214ENST00000435747 PSPHP1O15172 72 aa3.2□□□□□ -1.9
CPNE1-214ENST00000435747 KRTAP15-1Q3LI76 137 aa3.2□□□□□ -1.9
CPNE1-214ENST00000435747 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
CPNE1-214ENST00000435747 K7ERS5 55 aa3.18□□□□□ -1.9
CPNE1-214ENST00000435747 V9GYY9 64 aa3.18□□□□□ -1.9
CPNE1-214ENST00000435747 MT1AP04731 61 aa3.1□□□□□ -1.91
CPNE1-214ENST00000435747 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
CPNE1-214ENST00000435747 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
CPNE1-214ENST00000435747 KRTAP9-4Q9BYQ2 154 aa3.09□□□□□ -1.91
CPNE1-214ENST00000435747 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
CPNE1-214ENST00000435747 A6NED7 52 aa3.05□□□□□ -1.92
CPNE1-214ENST00000435747 CDC42SE1Q9NRR8 79 aa3.05□□□□□ -1.92
CPNE1-214ENST00000435747 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
CPNE1-214ENST00000435747 ROMO1P60602 79 aa3.02□□□□□ -1.93
CPNE1-214ENST00000435747 RPS28P62857 69 aaKnown RBP2.97□□□□□ -1.93
CPNE1-214ENST00000435747 MT3P25713 68 aa2.8□□□□□ -1.96
CPNE1-214ENST00000435747 PCP4P48539 62 aa2.8□□□□□ -1.96
CPNE1-214ENST00000435747 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
CPNE1-214ENST00000435747 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
CPNE1-214ENST00000435747 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
CPNE1-214ENST00000435747 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
CPNE1-214ENST00000435747 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
CPNE1-214ENST00000435747 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
CPNE1-214ENST00000435747 BRK1Q8WUW1 75 aa2.52□□□□□ -2.01
CPNE1-214ENST00000435747 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
CPNE1-214ENST00000435747 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
CPNE1-214ENST00000435747 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
CPNE1-214ENST00000435747 PRAC1Q96KF2 57 aa2.34□□□□□ -2.03
CPNE1-214ENST00000435747 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
CPNE1-214ENST00000435747 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
CPNE1-214ENST00000435747 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
CPNE1-214ENST00000435747 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
CPNE1-214ENST00000435747 PRO0628Q9UI54 55 aa2.11□□□□□ -2.07
CPNE1-214ENST00000435747 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CPNE1-214ENST00000435747 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
CPNE1-214ENST00000435747 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
CPNE1-214ENST00000435747 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
CPNE1-214ENST00000435747 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
CPNE1-214ENST00000435747 SVIPQ8NHG7 77 aa1.9□□□□□ -2.11
CPNE1-214ENST00000435747 PRM1P04553 51 aa1.55□□□□□ -2.16
CPNE1-214ENST00000435747 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
CPNE1-214ENST00000435747 NDUFAF8A1L188 74 aa1.44□□□□□ -2.18
CPNE1-214ENST00000435747 INE1O15225 51 aa1.12□□□□□ -2.23
CPNE1-214ENST00000435747 A0A0A0MQY5 61 aa0.98□□□□□ -2.25
CPNE1-214ENST00000435747 H3BS24 57 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms