RNA–Protein interactions for RNA: ENST00000435422.7

SGCD-202, Transcript of sarcoglycan delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SGCD, Length 9,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-202ENST00000435422 LRP1BQ9NZR2 4599 aa2□□□□□ -2.09
SGCD-202ENST00000435422 HSPG2P98160 4391 aa2□□□□□ -2.09
SGCD-202ENST00000435422 MT1AP04731 61 aa1.98□□□□□ -2.09
SGCD-202ENST00000435422 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
SGCD-202ENST00000435422 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
SGCD-202ENST00000435422 SYNE2Q8WXH0 6885 aaKnown RBP1.93□□□□□ -2.1
SGCD-202ENST00000435422 RYR3Q15413 4870 aa1.93□□□□□ -2.1
SGCD-202ENST00000435422 FAT3Q8TDW7 4589 aa1.92□□□□□ -2.1
SGCD-202ENST00000435422 RYR2Q92736 4967 aa1.92□□□□□ -2.1
SGCD-202ENST00000435422 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.11
SGCD-202ENST00000435422 HERC2O95714 4834 aa1.89□□□□□ -2.11
SGCD-202ENST00000435422 LPAP08519 4548 aa1.89□□□□□ -2.11
SGCD-202ENST00000435422 KRTAP2-2Q9BYT5 123 aa1.89□□□□□ -2.11
SGCD-202ENST00000435422 KRTAP9-2Q9BYQ4 174 aa1.88□□□□□ -2.11
SGCD-202ENST00000435422 MYCBP2O75592 4640 aa1.88□□□□□ -2.11
SGCD-202ENST00000435422 LCE2AQ5TA79 106 aaPredicted RBP1.88□□□□□ -2.11
SGCD-202ENST00000435422 KRTAP6-1Q3LI64 71 aa1.88□□□□□ -2.11
SGCD-202ENST00000435422 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
SGCD-202ENST00000435422 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
SGCD-202ENST00000435422 KRTAP19-7Q3SYF9 63 aa1.85□□□□□ -2.11
SGCD-202ENST00000435422 KRTAP17-1Q9BYP8 105 aa1.85□□□□□ -2.11
SGCD-202ENST00000435422 HERC1Q15751 4861 aa1.85□□□□□ -2.11
SGCD-202ENST00000435422 KRTAP9-4Q9BYQ2 154 aa1.84□□□□□ -2.12
SGCD-202ENST00000435422 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
SGCD-202ENST00000435422 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
SGCD-202ENST00000435422 KMT2CQ8NEZ4 4911 aaKnown RBP1.79□□□□□ -2.12
SGCD-202ENST00000435422 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.12
SGCD-202ENST00000435422 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
SGCD-202ENST00000435422 KRTAP9-6A0A140TA67 174 aa1.75□□□□□ -2.13
SGCD-202ENST00000435422 UBR4Q5T4S7 5183 aa1.74□□□□□ -2.13
SGCD-202ENST00000435422 KRTAP9-6A8MVA2 160 aa1.72□□□□□ -2.13
SGCD-202ENST00000435422 HMCN2Q8NDA2 5059 aa1.7□□□□□ -2.14
SGCD-202ENST00000435422 KRTAP19-2Q3LHN2 52 aa1.69□□□□□ -2.14
SGCD-202ENST00000435422 LRP2P98164 4655 aa1.68□□□□□ -2.14
SGCD-202ENST00000435422 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.14
SGCD-202ENST00000435422 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
SGCD-202ENST00000435422 FAT4Q6V0I7 4981 aa1.62□□□□□ -2.15
SGCD-202ENST00000435422 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
SGCD-202ENST00000435422 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
SGCD-202ENST00000435422 KRTAP4-12Q9BQ66 201 aa1.56□□□□□ -2.16
SGCD-202ENST00000435422 KRTAP4-2Q9BYR5 136 aa1.56□□□□□ -2.16
SGCD-202ENST00000435422 KRTAP4-6Q9BYQ5 205 aa1.56□□□□□ -2.16
SGCD-202ENST00000435422 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.56□□□□□ -2.16
SGCD-202ENST00000435422 SYNE1Q8NF91 8797 aaKnown RBP1.55□□□□□ -2.16
SGCD-202ENST00000435422 FSIP2Q5CZC0 6907 aa1.55□□□□□ -2.16
SGCD-202ENST00000435422 USH2AO75445 5202 aa1.47□□□□□ -2.17
SGCD-202ENST00000435422 MUC2Q02817 5179 aa1.43□□□□□ -2.18
SGCD-202ENST00000435422 KMT2DO14686 5537 aa1.43□□□□□ -2.18
SGCD-202ENST00000435422 SSPOA2VEC9 5147 aa1.38□□□□□ -2.19
SGCD-202ENST00000435422 DSTQ03001 7570 aaKnown RBP1.34□□□□□ -2.2
SGCD-202ENST00000435422 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.2
SGCD-202ENST00000435422 KRTAP5-5Q701N2 237 aaPredicted RBP1.32□□□□□ -2.2
SGCD-202ENST00000435422 MDN1Q9NU22 5596 aa1.28□□□□□ -2.2
SGCD-202ENST00000435422 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.21
SGCD-202ENST00000435422 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
SGCD-202ENST00000435422 KRTAP5-4Q6L8H1 288 aa1.24□□□□□ -2.21
SGCD-202ENST00000435422 NEBP20929 6669 aa1.19□□□□□ -2.22
SGCD-202ENST00000435422 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
SGCD-202ENST00000435422 KRTAP5-9P26371 169 aa1.16□□□□□ -2.22
SGCD-202ENST00000435422 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
SGCD-202ENST00000435422 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
SGCD-202ENST00000435422 KRTAP5-2Q701N4 177 aa1.06□□□□□ -2.24
SGCD-202ENST00000435422 KRTAP5-3Q6L8H2 238 aa1.05□□□□□ -2.24
SGCD-202ENST00000435422 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
SGCD-202ENST00000435422 MUC5BQ9HC84 5762 aaPredicted RBP1.02□□□□□ -2.25
SGCD-202ENST00000435422 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
SGCD-202ENST00000435422 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
SGCD-202ENST00000435422 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
SGCD-202ENST00000435422 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
SGCD-202ENST00000435422 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
SGCD-202ENST00000435422 KRTAP5-1Q6L8H4 278 aa0.91□□□□□ -2.26
SGCD-202ENST00000435422 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.83□□□□□ -2.28
SGCD-202ENST00000435422 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
SGCD-202ENST00000435422 KRTAP5-11Q6L8G4 156 aa0.8□□□□□ -2.28
SGCD-202ENST00000435422 KRTAP21-2Q3LI59 83 aa0.77□□□□□ -2.29
SGCD-202ENST00000435422 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
SGCD-202ENST00000435422 KRTAP5-7Q6L8G8 165 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 15.2 ms