RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 VPS13AQ96RL7 3174 aa0.35□□□□□ -2.35
HMGB3P10-201ENST00000434734 RNF213Q63HN8 5207 aa0.35□□□□□ -2.35
HMGB3P10-201ENST00000434734 CFAP54Q96N23 3096 aa0.34□□□□□ -2.35
HMGB3P10-201ENST00000434734 CEP250Q9BV73 2442 aa0.34□□□□□ -2.35
HMGB3P10-201ENST00000434734 FREM2Q5SZK8 3169 aa0.34□□□□□ -2.35
HMGB3P10-201ENST00000434734 HTN1P15515 57 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 RPS29P62273 56 aaKnown RBP0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 CFAP47Q6ZTR5 3102 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 RYR2Q92736 4967 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 CSMD2Q7Z408 3487 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 RYR1P21817 5038 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 DNAH12Q6ZR08 3092 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 ADGRG4Q8IZF6 3080 aa0.34□□□□□ -2.36
HMGB3P10-201ENST00000434734 DCHS1Q96JQ0 3298 aa0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 C5orf42Q9H799 3197 aa0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 DNAH5Q8TE73 4624 aa0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 DEFB136Q30KP8 78 aa0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 SPTAN1Q13813 2472 aaKnown RBP0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 SSPOA2VEC9 5147 aa0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 ITPR1Q14643 2758 aa0.33□□□□□ -2.36
HMGB3P10-201ENST00000434734 MGAQ8IWI9 3026 aa0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 TLN1Q9Y490 2541 aaKnown RBP0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 MUC3AQ02505 3323 aa0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 A0A096LNI7 61 aa0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 DOPEY1Q5JWR5 2465 aa0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 MYO9AB2RTY4 2548 aa0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 FRYLO94915 3013 aa0.32□□□□□ -2.36
HMGB3P10-201ENST00000434734 LAMA2P24043 3122 aaKnown RBP0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 LOC400499M0QZD8 3231 aa0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 BOD1L1Q8NFC6 3051 aa0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 PLECQ15149 4684 aaKnown RBP0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 PRUNE2Q8WUY3 3088 aa0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 LRBAP50851 2863 aa0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 CEP295Q9C0D2 2601 aa0.31□□□□□ -2.36
HMGB3P10-201ENST00000434734 ABCA13Q86UQ4 5058 aa0.3□□□□□ -2.36
HMGB3P10-201ENST00000434734 DYNC1H1Q14204 4646 aaKnown RBP0.3□□□□□ -2.36
HMGB3P10-201ENST00000434734 NIPBLQ6KC79 2804 aaeCLIP0.3□□□□□ -2.36
HMGB3P10-201ENST00000434734 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
HMGB3P10-201ENST00000434734 DMXL2Q8TDJ6 3036 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 HERC1Q15751 4861 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 DEFB4AO15263 64 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 EYSQ5T1H1 3165 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 MUC17Q685J3 4493 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 RYR3Q15413 4870 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 CFAP46Q8IYW2 2715 aa0.29□□□□□ -2.36
HMGB3P10-201ENST00000434734 TEX15Q9BXT5 2789 aa0.28□□□□□ -2.36
HMGB3P10-201ENST00000434734 ITPR2Q14571 2701 aa0.28□□□□□ -2.36
HMGB3P10-201ENST00000434734 ATMQ13315 3056 aa0.28□□□□□ -2.36
HMGB3P10-201ENST00000434734 CENPEQ02224 2701 aa0.28□□□□□ -2.37
HMGB3P10-201ENST00000434734 HYDINQ4G0P3 5121 aa0.27□□□□□ -2.37
HMGB3P10-201ENST00000434734 HTN3P15516 51 aa0.27□□□□□ -2.37
HMGB3P10-201ENST00000434734 KRTAP19-2Q3LHN2 52 aa0.27□□□□□ -2.37
HMGB3P10-201ENST00000434734 EPPK1P58107 5090 aaKnown RBP0.26□□□□□ -2.37
HMGB3P10-201ENST00000434734 DNHD1Q96M86 4753 aa0.26□□□□□ -2.37
HMGB3P10-201ENST00000434734 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
HMGB3P10-201ENST00000434734 KRTAP19-8Q3LI54 63 aa0.24□□□□□ -2.37
HMGB3P10-201ENST00000434734 MUC12Q9UKN1 5478 aa0.22□□□□□ -2.37
HMGB3P10-201ENST00000434734 MT1EP04732 61 aa0.22□□□□□ -2.37
HMGB3P10-201ENST00000434734 MT1HL1P0DM35 61 aa0.22□□□□□ -2.37
HMGB3P10-201ENST00000434734 KRTAP20-1Q3LI63 56 aa0.22□□□□□ -2.37
HMGB3P10-201ENST00000434734 HERC2O95714 4834 aa0.21□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1BP07438 61 aa0.21□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1XP80297 61 aa0.21□□□□□ -2.38
HMGB3P10-201ENST00000434734 KRTAP19-7Q3SYF9 63 aa0.21□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1LQ93083 61 aa0.21□□□□□ -2.38
HMGB3P10-201ENST00000434734 BIRC6Q9NR09 4857 aa0.21□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT2AP02795 61 aa0.19□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1HP80294 61 aa0.19□□□□□ -2.38
HMGB3P10-201ENST00000434734 USH2AO75445 5202 aa0.18□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1FP04733 61 aa0.18□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1GP13640 62 aa0.17□□□□□ -2.38
HMGB3P10-201ENST00000434734 MT1MQ8N339 61 aa0.17□□□□□ -2.38
HMGB3P10-201ENST00000434734 KRTAP6-1Q3LI64 71 aa0.15□□□□□ -2.39
HMGB3P10-201ENST00000434734 KRTAP19-6Q3LI70 58 aa0.15□□□□□ -2.39
HMGB3P10-201ENST00000434734 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
HMGB3P10-201ENST00000434734 MT4P47944 62 aa0.05□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 74.1 ms