RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
CCDC12-202ENST00000425441 Q1T7F1 81 aa5.36□□□□□ -1.55
CCDC12-202ENST00000425441 RPS28P62857 69 aaKnown RBP5.35□□□□□ -1.55
CCDC12-202ENST00000425441 A8MU10 97 aa5.31□□□□□ -1.56
CCDC12-202ENST00000425441 PSPHP1O15172 72 aa5.31□□□□□ -1.56
CCDC12-202ENST00000425441 UQCR11O14957 56 aa5.3□□□□□ -1.56
CCDC12-202ENST00000425441 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
CCDC12-202ENST00000425441 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
CCDC12-202ENST00000425441 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
CCDC12-202ENST00000425441 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
CCDC12-202ENST00000425441 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
CCDC12-202ENST00000425441 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
CCDC12-202ENST00000425441 A6NED7 52 aa5.15□□□□□ -1.59
CCDC12-202ENST00000425441 MT3P25713 68 aa5.09□□□□□ -1.59
CCDC12-202ENST00000425441 K7ERS5 55 aa5.05□□□□□ -1.6
CCDC12-202ENST00000425441 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
CCDC12-202ENST00000425441 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
CCDC12-202ENST00000425441 KRTAP4-4Q9BYR3 166 aa5□□□□□ -1.61
CCDC12-202ENST00000425441 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
CCDC12-202ENST00000425441 TNP1P09430 55 aa4.94□□□□□ -1.62
CCDC12-202ENST00000425441 KRTAP19-3Q7Z4W3 81 aa4.92□□□□□ -1.62
CCDC12-202ENST00000425441 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
CCDC12-202ENST00000425441 MT1EP04732 61 aa4.9□□□□□ -1.63
CCDC12-202ENST00000425441 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
CCDC12-202ENST00000425441 KRTAP25-1Q3LHN0 102 aa4.83□□□□□ -1.64
CCDC12-202ENST00000425441 LCE3AQ5TA76 89 aa4.83□□□□□ -1.64
CCDC12-202ENST00000425441 KRTAP9-6A8MVA2 160 aa4.82□□□□□ -1.64
CCDC12-202ENST00000425441 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
CCDC12-202ENST00000425441 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
CCDC12-202ENST00000425441 MT1GP13640 62 aa4.8□□□□□ -1.64
CCDC12-202ENST00000425441 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
CCDC12-202ENST00000425441 ROMO1P60602 79 aa4.77□□□□□ -1.65
CCDC12-202ENST00000425441 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
CCDC12-202ENST00000425441 MT4P47944 62 aa4.71□□□□□ -1.66
CCDC12-202ENST00000425441 MT1MQ8N339 61 aa4.68□□□□□ -1.66
CCDC12-202ENST00000425441 MT1LQ93083 61 aa4.64□□□□□ -1.67
CCDC12-202ENST00000425441 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CCDC12-202ENST00000425441 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
CCDC12-202ENST00000425441 HMCN1Q96RW7 5635 aa4.57□□□□□ -1.68
CCDC12-202ENST00000425441 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
CCDC12-202ENST00000425441 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
CCDC12-202ENST00000425441 AHNAK2Q8IVF2 5795 aa4.48□□□□□ -1.69
CCDC12-202ENST00000425441 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
CCDC12-202ENST00000425441 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
CCDC12-202ENST00000425441 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CCDC12-202ENST00000425441 KRTAP5-7Q6L8G8 165 aa4.44□□□□□ -1.7
CCDC12-202ENST00000425441 KRTAP20-2Q3LI61 65 aa4.36□□□□□ -1.71
CCDC12-202ENST00000425441 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
CCDC12-202ENST00000425441 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
CCDC12-202ENST00000425441 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
CCDC12-202ENST00000425441 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
CCDC12-202ENST00000425441 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
CCDC12-202ENST00000425441 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
CCDC12-202ENST00000425441 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
CCDC12-202ENST00000425441 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
CCDC12-202ENST00000425441 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
CCDC12-202ENST00000425441 MT1AP04731 61 aa3.97□□□□□ -1.77
CCDC12-202ENST00000425441 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
CCDC12-202ENST00000425441 KRTAP5-8O75690 187 aa3.9□□□□□ -1.79
CCDC12-202ENST00000425441 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
CCDC12-202ENST00000425441 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
CCDC12-202ENST00000425441 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
CCDC12-202ENST00000425441 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
CCDC12-202ENST00000425441 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
CCDC12-202ENST00000425441 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
CCDC12-202ENST00000425441 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
CCDC12-202ENST00000425441 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
CCDC12-202ENST00000425441 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
CCDC12-202ENST00000425441 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
CCDC12-202ENST00000425441 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
CCDC12-202ENST00000425441 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
CCDC12-202ENST00000425441 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
CCDC12-202ENST00000425441 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
CCDC12-202ENST00000425441 INE1O15225 51 aa2.6□□□□□ -1.99
CCDC12-202ENST00000425441 PRM1P04553 51 aa2.47□□□□□ -2.01
CCDC12-202ENST00000425441 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
CCDC12-202ENST00000425441 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms