RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 AEBP2Q6ZN18 517 aaPredicted RBP33.73■■■□□ 2.99
CCDC12-202ENST00000425441 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
CCDC12-202ENST00000425441 CHIC1Q5VXU3 224 aa31.79■■■□□ 2.68
CCDC12-202ENST00000425441 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
CCDC12-202ENST00000425441 ABCC9O60706 1549 aa29.59■■■□□ 2.33
CCDC12-202ENST00000425441 SENP3Q9H4L4 574 aaPredicted RBP28.9■■■□□ 2.22
CCDC12-202ENST00000425441 PHF23Q9BUL5 403 aaPredicted RBP28.43■■■□□ 2.14
CCDC12-202ENST00000425441 RB1CC1Q8TDY2 1594 aa28.23■■■□□ 2.11
CCDC12-202ENST00000425441 NACADO15069 1562 aa28.02■■■□□ 2.08
CCDC12-202ENST00000425441 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
CCDC12-202ENST00000425441 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
CCDC12-202ENST00000425441 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
CCDC12-202ENST00000425441 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
CCDC12-202ENST00000425441 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
CCDC12-202ENST00000425441 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
CCDC12-202ENST00000425441 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
CCDC12-202ENST00000425441 DCAF1Q9Y4B6 1507 aa27.24■■□□□ 1.95
CCDC12-202ENST00000425441 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
CCDC12-202ENST00000425441 SCRIBQ14160 1630 aa26.92■■□□□ 1.9
CCDC12-202ENST00000425441 FOXD1Q16676 465 aa26.91■■□□□ 1.9
CCDC12-202ENST00000425441 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
CCDC12-202ENST00000425441 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
CCDC12-202ENST00000425441 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
CCDC12-202ENST00000425441 NCAPD3P42695 1498 aa25.83■■□□□ 1.73
CCDC12-202ENST00000425441 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
CCDC12-202ENST00000425441 SMARCA4P51532 1647 aa25.7■■□□□ 1.71
CCDC12-202ENST00000425441 SMARCA2P51531 1590 aa25.7■■□□□ 1.71
CCDC12-202ENST00000425441 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
CCDC12-202ENST00000425441 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
CCDC12-202ENST00000425441 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
CCDC12-202ENST00000425441 CUX2O14529 1486 aa25.6■■□□□ 1.69
CCDC12-202ENST00000425441 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
CCDC12-202ENST00000425441 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
CCDC12-202ENST00000425441 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
CCDC12-202ENST00000425441 NESP48681 1621 aa25.37■■□□□ 1.65
CCDC12-202ENST00000425441 MSH5O43196 834 aa25.36■■□□□ 1.65
CCDC12-202ENST00000425441 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
CCDC12-202ENST00000425441 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
CCDC12-202ENST00000425441 PLPPR3Q6T4P5 718 aa25.29■■□□□ 1.64
CCDC12-202ENST00000425441 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
CCDC12-202ENST00000425441 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
CCDC12-202ENST00000425441 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
CCDC12-202ENST00000425441 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
CCDC12-202ENST00000425441 PIAS4Q8N2W9 510 aaPredicted RBP25.09■■□□□ 1.61
CCDC12-202ENST00000425441 WIZO95785 1651 aa25.04■■□□□ 1.6
CCDC12-202ENST00000425441 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
CCDC12-202ENST00000425441 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
CCDC12-202ENST00000425441 PPP6R1Q9UPN7 881 aa24.91■■□□□ 1.58
CCDC12-202ENST00000425441 WDR62O43379 1518 aa24.85■■□□□ 1.57
CCDC12-202ENST00000425441 ADRA2BP18089 450 aa24.81■■□□□ 1.56
CCDC12-202ENST00000425441 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
CCDC12-202ENST00000425441 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
CCDC12-202ENST00000425441 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
CCDC12-202ENST00000425441 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
CCDC12-202ENST00000425441 CFTRP13569 1480 aa24.74■■□□□ 1.55
CCDC12-202ENST00000425441 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
CCDC12-202ENST00000425441 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
CCDC12-202ENST00000425441 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
CCDC12-202ENST00000425441 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
CCDC12-202ENST00000425441 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
CCDC12-202ENST00000425441 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
CCDC12-202ENST00000425441 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
CCDC12-202ENST00000425441 TOPBP1Q92547 1522 aa24.28■■□□□ 1.48
CCDC12-202ENST00000425441 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
CCDC12-202ENST00000425441 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.47
CCDC12-202ENST00000425441 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
CCDC12-202ENST00000425441 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
CCDC12-202ENST00000425441 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
CCDC12-202ENST00000425441 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
CCDC12-202ENST00000425441 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
CCDC12-202ENST00000425441 POLA1P09884 1462 aaPredicted RBP24.01■■□□□ 1.43
CCDC12-202ENST00000425441 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.433e-7■■■■□ 20.8
CCDC12-202ENST00000425441 ARHGEF11O15085 1522 aa23.98■■□□□ 1.43
CCDC12-202ENST00000425441 CHD1O14646 1710 aa23.96■■□□□ 1.43
CCDC12-202ENST00000425441 SOGA1O94964 1423 aa23.91■■□□□ 1.42
CCDC12-202ENST00000425441 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
CCDC12-202ENST00000425441 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
CCDC12-202ENST00000425441 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
CCDC12-202ENST00000425441 FBLN2P98095 1184 aa23.85■■□□□ 1.41
CCDC12-202ENST00000425441 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.41
CCDC12-202ENST00000425441 CUX1P39880 1505 aa23.81■■□□□ 1.4
CCDC12-202ENST00000425441 SNAPC4Q5SXM2 1469 aa23.78■■□□□ 1.4
CCDC12-202ENST00000425441 CYB5RLQ6IPT4 315 aa23.77■■□□□ 1.4
CCDC12-202ENST00000425441 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
CCDC12-202ENST00000425441 GRIN2BQ13224 1484 aa23.74■■□□□ 1.39
CCDC12-202ENST00000425441 ARAP1Q96P48 1450 aa23.72■■□□□ 1.39
CCDC12-202ENST00000425441 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
CCDC12-202ENST00000425441 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
CCDC12-202ENST00000425441 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
CCDC12-202ENST00000425441 SYNJ2O15056 1496 aa23.66■■□□□ 1.38
CCDC12-202ENST00000425441 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
CCDC12-202ENST00000425441 GAPVD1Q14C86 1478 aa23.63■■□□□ 1.37
CCDC12-202ENST00000425441 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
CCDC12-202ENST00000425441 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
CCDC12-202ENST00000425441 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
CCDC12-202ENST00000425441 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
CCDC12-202ENST00000425441 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
CCDC12-202ENST00000425441 BIVM-ERCC5R4GMW8 1640 aa23.48■■□□□ 1.35
CCDC12-202ENST00000425441 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
CCDC12-202ENST00000425441 GRIN2AQ12879 1464 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms