RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
SBDSP1-202ENST00000423945 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
SBDSP1-202ENST00000423945 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
SBDSP1-202ENST00000423945 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
SBDSP1-202ENST00000423945 LCE4AQ5TA78 99 aa6.1□□□□□ -1.43
SBDSP1-202ENST00000423945 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
SBDSP1-202ENST00000423945 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
SBDSP1-202ENST00000423945 PSPHP1O15172 72 aa6.08□□□□□ -1.44
SBDSP1-202ENST00000423945 Q1T7F1 81 aa6.07□□□□□ -1.44
SBDSP1-202ENST00000423945 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
SBDSP1-202ENST00000423945 V9GYY9 64 aa6.04□□□□□ -1.44
SBDSP1-202ENST00000423945 KRTAP5-4Q6L8H1 288 aa6.03□□□□□ -1.44
SBDSP1-202ENST00000423945 MT4P47944 62 aa6.02□□□□□ -1.45
SBDSP1-202ENST00000423945 K7ERS5 55 aa5.96□□□□□ -1.46
SBDSP1-202ENST00000423945 AHNAK2Q8IVF2 5795 aa5.94□□□□□ -1.46
SBDSP1-202ENST00000423945 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.46
SBDSP1-202ENST00000423945 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
SBDSP1-202ENST00000423945 A6NED7 52 aa5.83□□□□□ -1.48
SBDSP1-202ENST00000423945 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
SBDSP1-202ENST00000423945 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
SBDSP1-202ENST00000423945 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
SBDSP1-202ENST00000423945 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
SBDSP1-202ENST00000423945 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
SBDSP1-202ENST00000423945 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
SBDSP1-202ENST00000423945 KRTAP5-7Q6L8G8 165 aa5.72□□□□□ -1.49
SBDSP1-202ENST00000423945 CDC42SE1Q9NRR8 79 aa5.7□□□□□ -1.5
SBDSP1-202ENST00000423945 KRTAP20-2Q3LI61 65 aa5.68□□□□□ -1.5
SBDSP1-202ENST00000423945 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
SBDSP1-202ENST00000423945 PCP4P48539 62 aa5.66□□□□□ -1.5
SBDSP1-202ENST00000423945 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
SBDSP1-202ENST00000423945 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
SBDSP1-202ENST00000423945 ROMO1P60602 79 aa5.64□□□□□ -1.51
SBDSP1-202ENST00000423945 SPRR5A0A1B0GTR4 108 aa5.63□□□□□ -1.51
SBDSP1-202ENST00000423945 KRTAP12-4P60329 112 aa5.57□□□□□ -1.52
SBDSP1-202ENST00000423945 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
SBDSP1-202ENST00000423945 MT1AP04731 61 aa5.41□□□□□ -1.54
SBDSP1-202ENST00000423945 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
SBDSP1-202ENST00000423945 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
SBDSP1-202ENST00000423945 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
SBDSP1-202ENST00000423945 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
SBDSP1-202ENST00000423945 KRTAP6-2Q3LI66 62 aa5.13□□□□□ -1.59
SBDSP1-202ENST00000423945 KRTAP5-8O75690 187 aa5.02□□□□□ -1.61
SBDSP1-202ENST00000423945 BRK1Q8WUW1 75 aa5.01□□□□□ -1.61
SBDSP1-202ENST00000423945 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
SBDSP1-202ENST00000423945 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
SBDSP1-202ENST00000423945 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
SBDSP1-202ENST00000423945 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
SBDSP1-202ENST00000423945 MT3P25713 68 aa4.91□□□□□ -1.62
SBDSP1-202ENST00000423945 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
SBDSP1-202ENST00000423945 KRTAP5-1Q6L8H4 278 aa4.75□□□□□ -1.65
SBDSP1-202ENST00000423945 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
SBDSP1-202ENST00000423945 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
SBDSP1-202ENST00000423945 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
SBDSP1-202ENST00000423945 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
SBDSP1-202ENST00000423945 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
SBDSP1-202ENST00000423945 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
SBDSP1-202ENST00000423945 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
SBDSP1-202ENST00000423945 KTN1-AS1Q86SY8 53 aa4.16□□□□□ -1.74
SBDSP1-202ENST00000423945 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
SBDSP1-202ENST00000423945 KRTAP4-12Q9BQ66 201 aa4.02□□□□□ -1.77
SBDSP1-202ENST00000423945 SVIPQ8NHG7 77 aa3.96□□□□□ -1.78
SBDSP1-202ENST00000423945 H3BS24 57 aa3.92□□□□□ -1.78
SBDSP1-202ENST00000423945 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SBDSP1-202ENST00000423945 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
SBDSP1-202ENST00000423945 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
SBDSP1-202ENST00000423945 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
SBDSP1-202ENST00000423945 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
SBDSP1-202ENST00000423945 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
SBDSP1-202ENST00000423945 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
SBDSP1-202ENST00000423945 KRTAP4-4Q9BYR3 166 aa3.25□□□□□ -1.89
SBDSP1-202ENST00000423945 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
SBDSP1-202ENST00000423945 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
SBDSP1-202ENST00000423945 PRM1P04553 51 aa2.9□□□□□ -1.95
SBDSP1-202ENST00000423945 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
SBDSP1-202ENST00000423945 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
SBDSP1-202ENST00000423945 INE1O15225 51 aa2.38□□□□□ -2.03
SBDSP1-202ENST00000423945 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 1032.7 ms