RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 SEC61GP60059 68 aa3.26□□□□□ -1.89
SCRN1-204ENST00000421434 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
SCRN1-204ENST00000421434 ANAPC13Q9BS18 74 aa3.26□□□□□ -1.89
SCRN1-204ENST00000421434 SERP1Q9Y6X1 66 aa3.26□□□□□ -1.89
SCRN1-204ENST00000421434 KRTAP12-1P59990 96 aa3.24□□□□□ -1.89
SCRN1-204ENST00000421434 A0A1B0GU33 70 aa3.23□□□□□ -1.89
SCRN1-204ENST00000421434 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
SCRN1-204ENST00000421434 COA5Q86WW8 74 aa3.22□□□□□ -1.89
SCRN1-204ENST00000421434 SERP2Q8N6R1 65 aa3.22□□□□□ -1.89
SCRN1-204ENST00000421434 PCP4P48539 62 aa3.21□□□□□ -1.9
SCRN1-204ENST00000421434 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
SCRN1-204ENST00000421434 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
SCRN1-204ENST00000421434 COX7CP15954 63 aa3.2□□□□□ -1.9
SCRN1-204ENST00000421434 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
SCRN1-204ENST00000421434 TNP1P09430 55 aa3.15□□□□□ -1.91
SCRN1-204ENST00000421434 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
SCRN1-204ENST00000421434 A8MU10 97 aa3.13□□□□□ -1.91
SCRN1-204ENST00000421434 SMIM26A0A096LP01 95 aa3.12□□□□□ -1.91
SCRN1-204ENST00000421434 SPRR5A0A1B0GTR4 108 aa3.12□□□□□ -1.91
SCRN1-204ENST00000421434 H7BZZ5 65 aa3.09□□□□□ -1.91
SCRN1-204ENST00000421434 SVIPQ8NHG7 77 aa3.09□□□□□ -1.91
SCRN1-204ENST00000421434 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
SCRN1-204ENST00000421434 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
SCRN1-204ENST00000421434 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
SCRN1-204ENST00000421434 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
SCRN1-204ENST00000421434 A0A1B0GU69 56 aa3.06□□□□□ -1.92
SCRN1-204ENST00000421434 TMEM258P61165 79 aa3.06□□□□□ -1.92
SCRN1-204ENST00000421434 ATP5EP56381 51 aaPredicted RBP3.02□□□□□ -1.93
SCRN1-204ENST00000421434 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
SCRN1-204ENST00000421434 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
SCRN1-204ENST00000421434 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
SCRN1-204ENST00000421434 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
SCRN1-204ENST00000421434 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
SCRN1-204ENST00000421434 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SCRN1-204ENST00000421434 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
SCRN1-204ENST00000421434 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
SCRN1-204ENST00000421434 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
SCRN1-204ENST00000421434 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.95
SCRN1-204ENST00000421434 MT3P25713 68 aa2.83□□□□□ -1.96
SCRN1-204ENST00000421434 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
SCRN1-204ENST00000421434 PSPHP1O15172 72 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 Q1T7F1 81 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 V9GYY9 64 aa2.82□□□□□ -1.96
SCRN1-204ENST00000421434 UQCR11O14957 56 aa2.8□□□□□ -1.96
SCRN1-204ENST00000421434 MT1AP04731 61 aa2.8□□□□□ -1.96
SCRN1-204ENST00000421434 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
SCRN1-204ENST00000421434 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
SCRN1-204ENST00000421434 A6NED7 52 aa2.73□□□□□ -1.97
SCRN1-204ENST00000421434 MIR22HGQ0VDD5 57 aa2.73□□□□□ -1.97
SCRN1-204ENST00000421434 K7ERS5 55 aa2.71□□□□□ -1.98
SCRN1-204ENST00000421434 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
SCRN1-204ENST00000421434 BRK1Q8WUW1 75 aa2.67□□□□□ -1.98
SCRN1-204ENST00000421434 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
SCRN1-204ENST00000421434 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
SCRN1-204ENST00000421434 PRO0628Q9UI54 55 aa2.55□□□□□ -2
SCRN1-204ENST00000421434 PMAIP1Q13794 54 aa2.51□□□□□ -2.01
SCRN1-204ENST00000421434 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SCRN1-204ENST00000421434 ROMO1P60602 79 aa2.48□□□□□ -2.01
SCRN1-204ENST00000421434 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SCRN1-204ENST00000421434 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
SCRN1-204ENST00000421434 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
SCRN1-204ENST00000421434 NDUFAF8A1L188 74 aa2.36□□□□□ -2.03
SCRN1-204ENST00000421434 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
SCRN1-204ENST00000421434 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
SCRN1-204ENST00000421434 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
SCRN1-204ENST00000421434 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
SCRN1-204ENST00000421434 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
SCRN1-204ENST00000421434 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
SCRN1-204ENST00000421434 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
SCRN1-204ENST00000421434 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SCRN1-204ENST00000421434 INE1O15225 51 aa1.5□□□□□ -2.17
SCRN1-204ENST00000421434 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SCRN1-204ENST00000421434 PRM1P04553 51 aa1.3□□□□□ -2.2
SCRN1-204ENST00000421434 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 51.3 ms