RNA–Protein interactions for RNA: ENST00000420568.5

SLC13A3-206, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 1,256 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-206ENST00000420568 TMEM258P61165 79 aa5.71□□□□□ -1.5
SLC13A3-206ENST00000420568 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
SLC13A3-206ENST00000420568 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
SLC13A3-206ENST00000420568 LCE4AQ5TA78 99 aa5.67□□□□□ -1.5
SLC13A3-206ENST00000420568 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
SLC13A3-206ENST00000420568 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
SLC13A3-206ENST00000420568 UQCR11O14957 56 aa5.61□□□□□ -1.51
SLC13A3-206ENST00000420568 MT4P47944 62 aa5.6□□□□□ -1.51
SLC13A3-206ENST00000420568 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
SLC13A3-206ENST00000420568 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
SLC13A3-206ENST00000420568 KRTAP9-9Q9BYP9 154 aa5.55□□□□□ -1.52
SLC13A3-206ENST00000420568 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
SLC13A3-206ENST00000420568 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
SLC13A3-206ENST00000420568 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
SLC13A3-206ENST00000420568 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
SLC13A3-206ENST00000420568 PSPHP1O15172 72 aa5.44□□□□□ -1.54
SLC13A3-206ENST00000420568 AHNAK2Q8IVF2 5795 aa5.41□□□□□ -1.54
SLC13A3-206ENST00000420568 K7ERS5 55 aa5.41□□□□□ -1.54
SLC13A3-206ENST00000420568 V9GYY9 64 aa5.39□□□□□ -1.55
SLC13A3-206ENST00000420568 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
SLC13A3-206ENST00000420568 Q1T7F1 81 aa5.34□□□□□ -1.55
SLC13A3-206ENST00000420568 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
SLC13A3-206ENST00000420568 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
SLC13A3-206ENST00000420568 A6NED7 52 aa5.25□□□□□ -1.57
SLC13A3-206ENST00000420568 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
SLC13A3-206ENST00000420568 KRTAP19-4Q3LI73 84 aa5.23□□□□□ -1.57
SLC13A3-206ENST00000420568 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
SLC13A3-206ENST00000420568 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
SLC13A3-206ENST00000420568 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
SLC13A3-206ENST00000420568 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
SLC13A3-206ENST00000420568 KRTAP5-7Q6L8G8 165 aa5.15□□□□□ -1.59
SLC13A3-206ENST00000420568 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
SLC13A3-206ENST00000420568 CDC42SE1Q9NRR8 79 aa5.12□□□□□ -1.59
SLC13A3-206ENST00000420568 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
SLC13A3-206ENST00000420568 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
SLC13A3-206ENST00000420568 PCP4P48539 62 aa5.03□□□□□ -1.6
SLC13A3-206ENST00000420568 ROMO1P60602 79 aa5.03□□□□□ -1.6
SLC13A3-206ENST00000420568 RPS28P62857 69 aaKnown RBP5.03□□□□□ -1.6
SLC13A3-206ENST00000420568 KRTAP4-2Q9BYR5 136 aa5.03□□□□□ -1.6
SLC13A3-206ENST00000420568 KRTAP4-11Q9BYQ6 195 aa4.93□□□□□ -1.62
SLC13A3-206ENST00000420568 MT1AP04731 61 aa4.89□□□□□ -1.63
SLC13A3-206ENST00000420568 H3BS24 57 aa4.87□□□□□ -1.63
SLC13A3-206ENST00000420568 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
SLC13A3-206ENST00000420568 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
SLC13A3-206ENST00000420568 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
SLC13A3-206ENST00000420568 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
SLC13A3-206ENST00000420568 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
SLC13A3-206ENST00000420568 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
SLC13A3-206ENST00000420568 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
SLC13A3-206ENST00000420568 MT3P25713 68 aa4.5□□□□□ -1.69
SLC13A3-206ENST00000420568 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
SLC13A3-206ENST00000420568 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
SLC13A3-206ENST00000420568 MUC5ACP98088 5654 aa4.45□□□□□ -1.7
SLC13A3-206ENST00000420568 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
SLC13A3-206ENST00000420568 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
SLC13A3-206ENST00000420568 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
SLC13A3-206ENST00000420568 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
SLC13A3-206ENST00000420568 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
SLC13A3-206ENST00000420568 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
SLC13A3-206ENST00000420568 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SLC13A3-206ENST00000420568 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
SLC13A3-206ENST00000420568 SVIPQ8NHG7 77 aa3.66□□□□□ -1.82
SLC13A3-206ENST00000420568 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
SLC13A3-206ENST00000420568 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
SLC13A3-206ENST00000420568 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SLC13A3-206ENST00000420568 LUZP6Q538Z0 58 aa3.45□□□□□ -1.86
SLC13A3-206ENST00000420568 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
SLC13A3-206ENST00000420568 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SLC13A3-206ENST00000420568 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SLC13A3-206ENST00000420568 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
SLC13A3-206ENST00000420568 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
SLC13A3-206ENST00000420568 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
SLC13A3-206ENST00000420568 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SLC13A3-206ENST00000420568 NDUFAF8A1L188 74 aa2.75□□□□□ -1.97
SLC13A3-206ENST00000420568 PRM1P04553 51 aa2.59□□□□□ -1.99
SLC13A3-206ENST00000420568 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
SLC13A3-206ENST00000420568 INE1O15225 51 aa2.32□□□□□ -2.04
SLC13A3-206ENST00000420568 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 144.3 ms