RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 MT4P47944 62 aa7.49□□□□□ -1.21
PTPN4-202ENST00000420482 AHNAK2Q8IVF2 5795 aa7.48□□□□□ -1.21
PTPN4-202ENST00000420482 CCDC179H3BU77 68 aa7.4□□□□□ -1.22
PTPN4-202ENST00000420482 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
PTPN4-202ENST00000420482 KRTAP5-4Q6L8H1 288 aa7.35□□□□□ -1.23
PTPN4-202ENST00000420482 KRTAP5-10Q6L8G5 202 aa7.33□□□□□ -1.24
PTPN4-202ENST00000420482 KRTAP4-3Q9BYR4 195 aa7.33□□□□□ -1.24
PTPN4-202ENST00000420482 UQCR11O14957 56 aa7.31□□□□□ -1.24
PTPN4-202ENST00000420482 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
PTPN4-202ENST00000420482 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
PTPN4-202ENST00000420482 TMEM258P61165 79 aa7.2□□□□□ -1.26
PTPN4-202ENST00000420482 KRTAP4-7Q9BYR0 210 aa7.13□□□□□ -1.27
PTPN4-202ENST00000420482 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
PTPN4-202ENST00000420482 K7ERS5 55 aa7.11□□□□□ -1.27
PTPN4-202ENST00000420482 KRTAP5-7Q6L8G8 165 aa7.11□□□□□ -1.27
PTPN4-202ENST00000420482 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
PTPN4-202ENST00000420482 KRTAP5-3Q6L8H2 238 aa7.07□□□□□ -1.28
PTPN4-202ENST00000420482 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
PTPN4-202ENST00000420482 KRTAP20-2Q3LI61 65 aa6.95□□□□□ -1.3
PTPN4-202ENST00000420482 V9GYY9 64 aa6.94□□□□□ -1.3
PTPN4-202ENST00000420482 KRTAP5-5Q701N2 237 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-202ENST00000420482 LOC100996750A0A140TA64 210 aa6.92□□□□□ -1.3
PTPN4-202ENST00000420482 KRTAP12-4P60329 112 aa6.91□□□□□ -1.3
PTPN4-202ENST00000420482 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.3
PTPN4-202ENST00000420482 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
PTPN4-202ENST00000420482 PSPHP1O15172 72 aa6.83□□□□□ -1.32
PTPN4-202ENST00000420482 Q1T7F1 81 aa6.78□□□□□ -1.32
PTPN4-202ENST00000420482 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
PTPN4-202ENST00000420482 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
PTPN4-202ENST00000420482 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
PTPN4-202ENST00000420482 A6NED7 52 aa6.65□□□□□ -1.34
PTPN4-202ENST00000420482 CDC42SE1Q9NRR8 79 aa6.64□□□□□ -1.35
PTPN4-202ENST00000420482 RPS28P62857 69 aaKnown RBP6.52□□□□□ -1.37
PTPN4-202ENST00000420482 ROMO1P60602 79 aa6.49□□□□□ -1.37
PTPN4-202ENST00000420482 MT1AP04731 61 aa6.45□□□□□ -1.38
PTPN4-202ENST00000420482 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
PTPN4-202ENST00000420482 KRTAP6-1Q3LI64 71 aa6.39□□□□□ -1.39
PTPN4-202ENST00000420482 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
PTPN4-202ENST00000420482 PCP4P48539 62 aa6.34□□□□□ -1.39
PTPN4-202ENST00000420482 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
PTPN4-202ENST00000420482 AHNAKQ09666 5890 aaKnown RBP6.25□□□□□ -1.41
PTPN4-202ENST00000420482 KRTAP5-8O75690 187 aa6.24□□□□□ -1.41
PTPN4-202ENST00000420482 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
PTPN4-202ENST00000420482 KRTAP9-6A8MVA2 160 aa6.21□□□□□ -1.42
PTPN4-202ENST00000420482 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
PTPN4-202ENST00000420482 KRTAP6-2Q3LI66 62 aa6.15□□□□□ -1.42
PTPN4-202ENST00000420482 OBSCNQ5VST9 7968 aa6.1□□□□□ -1.43
PTPN4-202ENST00000420482 KRTAP4-12Q9BQ66 201 aa5.98□□□□□ -1.45
PTPN4-202ENST00000420482 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
PTPN4-202ENST00000420482 MT3P25713 68 aa5.96□□□□□ -1.46
PTPN4-202ENST00000420482 KRTAP5-1Q6L8H4 278 aa5.78□□□□□ -1.48
PTPN4-202ENST00000420482 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
PTPN4-202ENST00000420482 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
PTPN4-202ENST00000420482 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
PTPN4-202ENST00000420482 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
PTPN4-202ENST00000420482 PMAIP1Q13794 54 aa5.16□□□□□ -1.58
PTPN4-202ENST00000420482 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
PTPN4-202ENST00000420482 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
PTPN4-202ENST00000420482 SVIPQ8NHG7 77 aa4.98□□□□□ -1.61
PTPN4-202ENST00000420482 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
PTPN4-202ENST00000420482 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
PTPN4-202ENST00000420482 H3BS24 57 aa4.73□□□□□ -1.65
PTPN4-202ENST00000420482 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
PTPN4-202ENST00000420482 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
PTPN4-202ENST00000420482 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-202ENST00000420482 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
PTPN4-202ENST00000420482 LCE3EQ5T5B0 92 aa4.51□□□□□ -1.69
PTPN4-202ENST00000420482 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
PTPN4-202ENST00000420482 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
PTPN4-202ENST00000420482 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
PTPN4-202ENST00000420482 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
PTPN4-202ENST00000420482 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
PTPN4-202ENST00000420482 NDUFAF8A1L188 74 aa3.69□□□□□ -1.82
PTPN4-202ENST00000420482 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
PTPN4-202ENST00000420482 PRM1P04553 51 aa3.27□□□□□ -1.89
PTPN4-202ENST00000420482 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
PTPN4-202ENST00000420482 INE1O15225 51 aa3.08□□□□□ -1.92
PTPN4-202ENST00000420482 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms