RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 KRTAP12-1P59990 96 aa5.1□□□□□ -1.59
SSB-204ENST00000417292 KRTAP5-7Q6L8G8 165 aa5.1□□□□□ -1.59
SSB-204ENST00000417292 A8MU10 97 aa5.09□□□□□ -1.59
SSB-204ENST00000417292 ATP5EP56381 51 aaPredicted RBP5.09□□□□□ -1.59
SSB-204ENST00000417292 KRTAP5-3Q6L8H2 238 aa5.07□□□□□ -1.6
SSB-204ENST00000417292 SMIM26A0A096LP01 95 aa5.03□□□□□ -1.6
SSB-204ENST00000417292 TMEM258P61165 79 aa5.02□□□□□ -1.61
SSB-204ENST00000417292 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
SSB-204ENST00000417292 MT1GP13640 62 aa5□□□□□ -1.61
SSB-204ENST00000417292 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
SSB-204ENST00000417292 LINC01558Q9Y6Z2 57 aa4.99□□□□□ -1.61
SSB-204ENST00000417292 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
SSB-204ENST00000417292 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SSB-204ENST00000417292 SPRR5A0A1B0GTR4 108 aa4.9□□□□□ -1.63
SSB-204ENST00000417292 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.63
SSB-204ENST00000417292 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
SSB-204ENST00000417292 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
SSB-204ENST00000417292 UQCR11O14957 56 aa4.84□□□□□ -1.63
SSB-204ENST00000417292 MT1LQ93083 61 aa4.83□□□□□ -1.64
SSB-204ENST00000417292 TNP1P09430 55 aa4.8□□□□□ -1.64
SSB-204ENST00000417292 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SSB-204ENST00000417292 PSPHP1O15172 72 aa4.78□□□□□ -1.64
SSB-204ENST00000417292 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
SSB-204ENST00000417292 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
SSB-204ENST00000417292 Q1T7F1 81 aa4.71□□□□□ -1.66
SSB-204ENST00000417292 V9GYY9 64 aa4.7□□□□□ -1.66
SSB-204ENST00000417292 H3BS24 57 aa4.64□□□□□ -1.67
SSB-204ENST00000417292 AHNAKQ09666 5890 aaKnown RBP4.62□□□□□ -1.67
SSB-204ENST00000417292 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
SSB-204ENST00000417292 K7ERS5 55 aa4.61□□□□□ -1.67
SSB-204ENST00000417292 PCP4P48539 62 aa4.61□□□□□ -1.67
SSB-204ENST00000417292 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
SSB-204ENST00000417292 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
SSB-204ENST00000417292 A6NED7 52 aa4.58□□□□□ -1.68
SSB-204ENST00000417292 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
SSB-204ENST00000417292 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
SSB-204ENST00000417292 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
SSB-204ENST00000417292 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
SSB-204ENST00000417292 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
SSB-204ENST00000417292 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
SSB-204ENST00000417292 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SSB-204ENST00000417292 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
SSB-204ENST00000417292 ROMO1P60602 79 aa4.35□□□□□ -1.71
SSB-204ENST00000417292 OBSCNQ5VST9 7968 aa4.34□□□□□ -1.71
SSB-204ENST00000417292 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
SSB-204ENST00000417292 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
SSB-204ENST00000417292 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SSB-204ENST00000417292 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
SSB-204ENST00000417292 MT1AP04731 61 aa4.08□□□□□ -1.76
SSB-204ENST00000417292 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
SSB-204ENST00000417292 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
SSB-204ENST00000417292 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
SSB-204ENST00000417292 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
SSB-204ENST00000417292 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
SSB-204ENST00000417292 MT3P25713 68 aa3.74□□□□□ -1.81
SSB-204ENST00000417292 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
SSB-204ENST00000417292 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
SSB-204ENST00000417292 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
SSB-204ENST00000417292 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
SSB-204ENST00000417292 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
SSB-204ENST00000417292 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
SSB-204ENST00000417292 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
SSB-204ENST00000417292 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SSB-204ENST00000417292 SVIPQ8NHG7 77 aa3.28□□□□□ -1.88
SSB-204ENST00000417292 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
SSB-204ENST00000417292 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
SSB-204ENST00000417292 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SSB-204ENST00000417292 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
SSB-204ENST00000417292 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
SSB-204ENST00000417292 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
SSB-204ENST00000417292 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
SSB-204ENST00000417292 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
SSB-204ENST00000417292 NDUFAF8A1L188 74 aa2.54□□□□□ -2
SSB-204ENST00000417292 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
SSB-204ENST00000417292 PRM1P04553 51 aa2.27□□□□□ -2.05
SSB-204ENST00000417292 A0A0A0MQY5 61 aa2.06□□□□□ -2.08
SSB-204ENST00000417292 INE1O15225 51 aa1.96□□□□□ -2.1
SSB-204ENST00000417292 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 14 ms