RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
SSB-203ENST00000413002 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
SSB-203ENST00000413002 MT1EP04732 61 aa4.88□□□□□ -1.63
SSB-203ENST00000413002 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
SSB-203ENST00000413002 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
SSB-203ENST00000413002 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
SSB-203ENST00000413002 UQCR11O14957 56 aa4.84□□□□□ -1.63
SSB-203ENST00000413002 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
SSB-203ENST00000413002 TNP1P09430 55 aa4.8□□□□□ -1.64
SSB-203ENST00000413002 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SSB-203ENST00000413002 PSPHP1O15172 72 aa4.78□□□□□ -1.64
SSB-203ENST00000413002 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
SSB-203ENST00000413002 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.76□□□□□ -1.65
SSB-203ENST00000413002 Q1T7F1 81 aa4.71□□□□□ -1.66
SSB-203ENST00000413002 V9GYY9 64 aa4.7□□□□□ -1.66
SSB-203ENST00000413002 DSTQ03001 7570 aaKnown RBP4.7□□□□□ -1.66
SSB-203ENST00000413002 MT1GP13640 62 aa4.69□□□□□ -1.66
SSB-203ENST00000413002 MT1LQ93083 61 aa4.69□□□□□ -1.66
SSB-203ENST00000413002 MT1MQ8N339 61 aa4.65□□□□□ -1.67
SSB-203ENST00000413002 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
SSB-203ENST00000413002 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
SSB-203ENST00000413002 K7ERS5 55 aa4.61□□□□□ -1.67
SSB-203ENST00000413002 PCP4P48539 62 aa4.61□□□□□ -1.67
SSB-203ENST00000413002 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
SSB-203ENST00000413002 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
SSB-203ENST00000413002 A6NED7 52 aa4.58□□□□□ -1.68
SSB-203ENST00000413002 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
SSB-203ENST00000413002 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
SSB-203ENST00000413002 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SSB-203ENST00000413002 MT4P47944 62 aa4.41□□□□□ -1.7
SSB-203ENST00000413002 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
SSB-203ENST00000413002 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
SSB-203ENST00000413002 ROMO1P60602 79 aa4.35□□□□□ -1.71
SSB-203ENST00000413002 SVIPQ8NHG7 77 aa4.35□□□□□ -1.71
SSB-203ENST00000413002 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
SSB-203ENST00000413002 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
SSB-203ENST00000413002 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
SSB-203ENST00000413002 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
SSB-203ENST00000413002 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.74
SSB-203ENST00000413002 MT3P25713 68 aa4.15□□□□□ -1.75
SSB-203ENST00000413002 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
SSB-203ENST00000413002 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
SSB-203ENST00000413002 SYNE1Q8NF91 8797 aaKnown RBP4.11□□□□□ -1.75
SSB-203ENST00000413002 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
SSB-203ENST00000413002 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
SSB-203ENST00000413002 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
SSB-203ENST00000413002 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
SSB-203ENST00000413002 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
SSB-203ENST00000413002 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
SSB-203ENST00000413002 MT1AP04731 61 aa3.97□□□□□ -1.77
SSB-203ENST00000413002 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
SSB-203ENST00000413002 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
SSB-203ENST00000413002 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
SSB-203ENST00000413002 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
SSB-203ENST00000413002 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
SSB-203ENST00000413002 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
SSB-203ENST00000413002 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
SSB-203ENST00000413002 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
SSB-203ENST00000413002 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
SSB-203ENST00000413002 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
SSB-203ENST00000413002 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SSB-203ENST00000413002 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
SSB-203ENST00000413002 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
SSB-203ENST00000413002 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
SSB-203ENST00000413002 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
SSB-203ENST00000413002 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
SSB-203ENST00000413002 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
SSB-203ENST00000413002 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
SSB-203ENST00000413002 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
SSB-203ENST00000413002 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
SSB-203ENST00000413002 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
SSB-203ENST00000413002 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
SSB-203ENST00000413002 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SSB-203ENST00000413002 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SSB-203ENST00000413002 PRM1P04553 51 aa2.27□□□□□ -2.05
SSB-203ENST00000413002 INE1O15225 51 aa1.96□□□□□ -2.1
SSB-203ENST00000413002 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
SSB-203ENST00000413002 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms