RNA–Protein interactions for RNA: ENST00000409633.5

UBE2F-203, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 837 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-203ENST00000409633 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
UBE2F-203ENST00000409633 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
UBE2F-203ENST00000409633 Q1T7F1 81 aa6.86□□□□□ -1.31
UBE2F-203ENST00000409633 V9GYY9 64 aa6.84□□□□□ -1.31
UBE2F-203ENST00000409633 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
UBE2F-203ENST00000409633 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
UBE2F-203ENST00000409633 K7ERS5 55 aa6.76□□□□□ -1.33
UBE2F-203ENST00000409633 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
UBE2F-203ENST00000409633 A6NED7 52 aa6.69□□□□□ -1.34
UBE2F-203ENST00000409633 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
UBE2F-203ENST00000409633 MT4P47944 62 aa6.65□□□□□ -1.34
UBE2F-203ENST00000409633 PCP4P48539 62 aa6.61□□□□□ -1.35
UBE2F-203ENST00000409633 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
UBE2F-203ENST00000409633 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
UBE2F-203ENST00000409633 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
UBE2F-203ENST00000409633 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
UBE2F-203ENST00000409633 CDC42SE1Q9NRR8 79 aa6.45□□□□□ -1.38
UBE2F-203ENST00000409633 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
UBE2F-203ENST00000409633 GPR98Q8WXG9 6306 aa6.42□□□□□ -1.38
UBE2F-203ENST00000409633 LOC100996750A0A140TA64 210 aa6.42□□□□□ -1.38
UBE2F-203ENST00000409633 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
UBE2F-203ENST00000409633 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
UBE2F-203ENST00000409633 ROMO1P60602 79 aa6.38□□□□□ -1.39
UBE2F-203ENST00000409633 KRTAP5-5Q701N2 237 aaPredicted RBP6.35□□□□□ -1.39
UBE2F-203ENST00000409633 LCE3CQ5T5A8 94 aa6.28□□□□□ -1.4
UBE2F-203ENST00000409633 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
UBE2F-203ENST00000409633 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
UBE2F-203ENST00000409633 AHNAK2Q8IVF2 5795 aa6.19□□□□□ -1.42
UBE2F-203ENST00000409633 KRTAP12-4P60329 112 aa6.12□□□□□ -1.43
UBE2F-203ENST00000409633 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
UBE2F-203ENST00000409633 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
UBE2F-203ENST00000409633 SYNE1Q8NF91 8797 aaKnown RBP6.09□□□□□ -1.44
UBE2F-203ENST00000409633 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
UBE2F-203ENST00000409633 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
UBE2F-203ENST00000409633 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
UBE2F-203ENST00000409633 MT1AP04731 61 aa5.95□□□□□ -1.46
UBE2F-203ENST00000409633 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
UBE2F-203ENST00000409633 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
UBE2F-203ENST00000409633 KRTAP5-2Q701N4 177 aa5.74□□□□□ -1.49
UBE2F-203ENST00000409633 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
UBE2F-203ENST00000409633 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
UBE2F-203ENST00000409633 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
UBE2F-203ENST00000409633 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
UBE2F-203ENST00000409633 KRTAP5-8O75690 187 aa5.44□□□□□ -1.54
UBE2F-203ENST00000409633 MT3P25713 68 aa5.41□□□□□ -1.54
UBE2F-203ENST00000409633 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
UBE2F-203ENST00000409633 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
UBE2F-203ENST00000409633 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
UBE2F-203ENST00000409633 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
UBE2F-203ENST00000409633 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
UBE2F-203ENST00000409633 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
UBE2F-203ENST00000409633 AHNAKQ09666 5890 aaKnown RBP5.03□□□□□ -1.6
UBE2F-203ENST00000409633 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
UBE2F-203ENST00000409633 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
UBE2F-203ENST00000409633 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
UBE2F-203ENST00000409633 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
UBE2F-203ENST00000409633 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
UBE2F-203ENST00000409633 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
UBE2F-203ENST00000409633 LCE1CQ5T751 118 aa4.56□□□□□ -1.68
UBE2F-203ENST00000409633 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
UBE2F-203ENST00000409633 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
UBE2F-203ENST00000409633 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
UBE2F-203ENST00000409633 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
UBE2F-203ENST00000409633 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
UBE2F-203ENST00000409633 KRTAP5-11Q6L8G4 156 aa4.12□□□□□ -1.75
UBE2F-203ENST00000409633 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
UBE2F-203ENST00000409633 KRTAP21-2Q3LI59 83 aa3.9□□□□□ -1.79
UBE2F-203ENST00000409633 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
UBE2F-203ENST00000409633 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
UBE2F-203ENST00000409633 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
UBE2F-203ENST00000409633 H3BS24 57 aa3.52□□□□□ -1.85
UBE2F-203ENST00000409633 PRM1P04553 51 aa3.32□□□□□ -1.88
UBE2F-203ENST00000409633 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
UBE2F-203ENST00000409633 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
UBE2F-203ENST00000409633 INE1O15225 51 aa2.77□□□□□ -1.97
UBE2F-203ENST00000409633 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
UBE2F-203ENST00000409633 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms