RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
SCRN1-203ENST00000409570 V9GYY9 64 aa6.08□□□□□ -1.44
SCRN1-203ENST00000409570 KRTAP19-5Q3LI72 72 aa6.06□□□□□ -1.44
SCRN1-203ENST00000409570 MT1MQ8N339 61 aa6.06□□□□□ -1.44
SCRN1-203ENST00000409570 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
SCRN1-203ENST00000409570 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
SCRN1-203ENST00000409570 Q1T7F1 81 aa5.99□□□□□ -1.45
SCRN1-203ENST00000409570 MT1LQ93083 61 aa5.97□□□□□ -1.45
SCRN1-203ENST00000409570 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
SCRN1-203ENST00000409570 KRTAP4-3Q9BYR4 195 aa5.95□□□□□ -1.46
SCRN1-203ENST00000409570 PCP4P48539 62 aa5.94□□□□□ -1.46
SCRN1-203ENST00000409570 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
SCRN1-203ENST00000409570 PSPHP1O15172 72 aa5.9□□□□□ -1.46
SCRN1-203ENST00000409570 TNP1P09430 55 aa5.9□□□□□ -1.46
SCRN1-203ENST00000409570 RPS28P62857 69 aaKnown RBP5.89□□□□□ -1.47
SCRN1-203ENST00000409570 C10orf95Q9H7T3 257 aa5.88□□□□□ -1.47
SCRN1-203ENST00000409570 K7ERS5 55 aa5.86□□□□□ -1.47
SCRN1-203ENST00000409570 KRTAP20-2Q3LI61 65 aa5.76□□□□□ -1.49
SCRN1-203ENST00000409570 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
SCRN1-203ENST00000409570 A6NED7 52 aa5.75□□□□□ -1.49
SCRN1-203ENST00000409570 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
SCRN1-203ENST00000409570 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
SCRN1-203ENST00000409570 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
SCRN1-203ENST00000409570 KRTAP5-5Q701N2 237 aaPredicted RBP5.61□□□□□ -1.51
SCRN1-203ENST00000409570 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
SCRN1-203ENST00000409570 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
SCRN1-203ENST00000409570 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
SCRN1-203ENST00000409570 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
SCRN1-203ENST00000409570 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
SCRN1-203ENST00000409570 ROMO1P60602 79 aa5.44□□□□□ -1.54
SCRN1-203ENST00000409570 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
SCRN1-203ENST00000409570 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
SCRN1-203ENST00000409570 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
SCRN1-203ENST00000409570 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SCRN1-203ENST00000409570 AHNAKQ09666 5890 aaKnown RBP5.25□□□□□ -1.57
SCRN1-203ENST00000409570 KRTAP5-2Q701N4 177 aa5.24□□□□□ -1.57
SCRN1-203ENST00000409570 MUC5ACP98088 5654 aa5.23□□□□□ -1.57
SCRN1-203ENST00000409570 KRTAP5-8O75690 187 aa5.22□□□□□ -1.57
SCRN1-203ENST00000409570 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
SCRN1-203ENST00000409570 BRK1Q8WUW1 75 aa5.15□□□□□ -1.59
SCRN1-203ENST00000409570 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
SCRN1-203ENST00000409570 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
SCRN1-203ENST00000409570 MT1AP04731 61 aa5.06□□□□□ -1.6
SCRN1-203ENST00000409570 KRTAP9-9Q9BYP9 154 aa5.01□□□□□ -1.61
SCRN1-203ENST00000409570 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
SCRN1-203ENST00000409570 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
SCRN1-203ENST00000409570 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
SCRN1-203ENST00000409570 PMAIP1Q13794 54 aa4.88□□□□□ -1.63
SCRN1-203ENST00000409570 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
SCRN1-203ENST00000409570 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
SCRN1-203ENST00000409570 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
SCRN1-203ENST00000409570 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
SCRN1-203ENST00000409570 MT3P25713 68 aa4.63□□□□□ -1.67
SCRN1-203ENST00000409570 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
SCRN1-203ENST00000409570 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
SCRN1-203ENST00000409570 LCE1EQ5T753 118 aa4.38□□□□□ -1.71
SCRN1-203ENST00000409570 H3BS24 57 aa4.37□□□□□ -1.71
SCRN1-203ENST00000409570 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
SCRN1-203ENST00000409570 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
SCRN1-203ENST00000409570 LCE1BQ5T7P3 118 aa4.17□□□□□ -1.74
SCRN1-203ENST00000409570 LCE1CQ5T751 118 aa4.07□□□□□ -1.76
SCRN1-203ENST00000409570 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
SCRN1-203ENST00000409570 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
SCRN1-203ENST00000409570 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
SCRN1-203ENST00000409570 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
SCRN1-203ENST00000409570 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
SCRN1-203ENST00000409570 PHGR1C9JFL3 82 aa3.63□□□□□ -1.83
SCRN1-203ENST00000409570 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SCRN1-203ENST00000409570 KRTAP21-2Q3LI59 83 aa3.36□□□□□ -1.87
SCRN1-203ENST00000409570 NDUFAF8A1L188 74 aa3.27□□□□□ -1.89
SCRN1-203ENST00000409570 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SCRN1-203ENST00000409570 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
SCRN1-203ENST00000409570 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
SCRN1-203ENST00000409570 INE1O15225 51 aa2.75□□□□□ -1.97
SCRN1-203ENST00000409570 PRM1P04553 51 aa2.75□□□□□ -1.97
SCRN1-203ENST00000409570 KRTAP21-1Q3LI58 79 aa2.75□□□□□ -1.97
SCRN1-203ENST00000409570 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 347.4 ms