RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 HSPG2P98160 4391 aa2.52□□□□□ -2.01
RBFOX2-205ENST00000405409 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
RBFOX2-205ENST00000405409 LRP2P98164 4655 aa2.51□□□□□ -2.01
RBFOX2-205ENST00000405409 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
RBFOX2-205ENST00000405409 MACF1Q9UPN3 7388 aaKnown RBP2.49□□□□□ -2.01
RBFOX2-205ENST00000405409 KMT2AQ03164 3969 aa2.49□□□□□ -2.01
RBFOX2-205ENST00000405409 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
RBFOX2-205ENST00000405409 MT4P47944 62 aa2.48□□□□□ -2.01
RBFOX2-205ENST00000405409 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
RBFOX2-205ENST00000405409 MT1BP07438 61 aa2.46□□□□□ -2.02
RBFOX2-205ENST00000405409 KRTAP9-8Q9BYQ0 159 aa2.45□□□□□ -2.02
RBFOX2-205ENST00000405409 HECTD4Q9Y4D8 3996 aa2.45□□□□□ -2.02
RBFOX2-205ENST00000405409 LRP1Q07954 4544 aaKnown RBP2.45□□□□□ -2.02
RBFOX2-205ENST00000405409 LCE1DQ5T752 114 aa2.45□□□□□ -2.02
RBFOX2-205ENST00000405409 LYSTQ99698 3801 aa2.44□□□□□ -2.02
RBFOX2-205ENST00000405409 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
RBFOX2-205ENST00000405409 MT3P25713 68 aa2.43□□□□□ -2.02
RBFOX2-205ENST00000405409 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
RBFOX2-205ENST00000405409 MT1LQ93083 61 aa2.42□□□□□ -2.02
RBFOX2-205ENST00000405409 PKD1P98161 4303 aa2.42□□□□□ -2.02
RBFOX2-205ENST00000405409 LOC100996750A0A140TA64 210 aa2.4□□□□□ -2.02
RBFOX2-205ENST00000405409 KRTAP5-9P26371 169 aa2.4□□□□□ -2.03
RBFOX2-205ENST00000405409 FLGP20930 4061 aaPredicted RBP2.36□□□□□ -2.03
RBFOX2-205ENST00000405409 PKHD1P08F94 4074 aa2.36□□□□□ -2.03
RBFOX2-205ENST00000405409 MT1EP04732 61 aa2.35□□□□□ -2.03
RBFOX2-205ENST00000405409 USH2AO75445 5202 aa2.35□□□□□ -2.03
RBFOX2-205ENST00000405409 LCE5AQ5TCM9 118 aa2.34□□□□□ -2.03
RBFOX2-205ENST00000405409 MT1MQ8N339 61 aa2.31□□□□□ -2.04
RBFOX2-205ENST00000405409 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
RBFOX2-205ENST00000405409 KRTAP4-9Q9BYQ8 210 aa2.3□□□□□ -2.04
RBFOX2-205ENST00000405409 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
RBFOX2-205ENST00000405409 FSIP2Q5CZC0 6907 aa2.28□□□□□ -2.05
RBFOX2-205ENST00000405409 KRTAP9-9Q9BYP9 154 aa2.27□□□□□ -2.05
RBFOX2-205ENST00000405409 SYNE1Q8NF91 8797 aaKnown RBP2.25□□□□□ -2.05
RBFOX2-205ENST00000405409 MUC2Q02817 5179 aa2.24□□□□□ -2.05
RBFOX2-205ENST00000405409 AHNAK2Q8IVF2 5795 aa2.22□□□□□ -2.05
RBFOX2-205ENST00000405409 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
RBFOX2-205ENST00000405409 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
RBFOX2-205ENST00000405409 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
RBFOX2-205ENST00000405409 TNXBP22105 4242 aa2.22□□□□□ -2.05
RBFOX2-205ENST00000405409 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
RBFOX2-205ENST00000405409 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
RBFOX2-205ENST00000405409 LPAP08519 4548 aa2.19□□□□□ -2.06
RBFOX2-205ENST00000405409 MT1AP04731 61 aa2.16□□□□□ -2.06
RBFOX2-205ENST00000405409 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
RBFOX2-205ENST00000405409 KMT2DO14686 5537 aa2.11□□□□□ -2.07
RBFOX2-205ENST00000405409 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
RBFOX2-205ENST00000405409 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.07
RBFOX2-205ENST00000405409 MDN1Q9NU22 5596 aa2.06□□□□□ -2.08
RBFOX2-205ENST00000405409 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
RBFOX2-205ENST00000405409 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
RBFOX2-205ENST00000405409 KRTAP9-4Q9BYQ2 154 aa2.04□□□□□ -2.08
RBFOX2-205ENST00000405409 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
RBFOX2-205ENST00000405409 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
RBFOX2-205ENST00000405409 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
RBFOX2-205ENST00000405409 MUC5BQ9HC84 5762 aaPredicted RBP1.93□□□□□ -2.1
RBFOX2-205ENST00000405409 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
RBFOX2-205ENST00000405409 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
RBFOX2-205ENST00000405409 KRTAP9-6A8MVA2 160 aa1.9□□□□□ -2.11
RBFOX2-205ENST00000405409 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
RBFOX2-205ENST00000405409 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
RBFOX2-205ENST00000405409 KRTAP4-2Q9BYR5 136 aa1.77□□□□□ -2.13
RBFOX2-205ENST00000405409 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
RBFOX2-205ENST00000405409 MUC5ACP98088 5654 aa1.73□□□□□ -2.13
RBFOX2-205ENST00000405409 KRTAP4-6Q9BYQ5 205 aa1.7□□□□□ -2.14
RBFOX2-205ENST00000405409 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
RBFOX2-205ENST00000405409 KRTAP4-12Q9BQ66 201 aa1.64□□□□□ -2.15
RBFOX2-205ENST00000405409 KRTAP5-5Q701N2 237 aaPredicted RBP1.58□□□□□ -2.16
RBFOX2-205ENST00000405409 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
RBFOX2-205ENST00000405409 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
RBFOX2-205ENST00000405409 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
RBFOX2-205ENST00000405409 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
RBFOX2-205ENST00000405409 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
RBFOX2-205ENST00000405409 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
RBFOX2-205ENST00000405409 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
RBFOX2-205ENST00000405409 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
RBFOX2-205ENST00000405409 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 98.6 ms