RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
SPTLC1P3-201ENST00000403408 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
SPTLC1P3-201ENST00000403408 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
SPTLC1P3-201ENST00000403408 CHKB-CPT1BH3BT56 60 aa3.84□□□□□ -1.79
SPTLC1P3-201ENST00000403408 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
SPTLC1P3-201ENST00000403408 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
SPTLC1P3-201ENST00000403408 SPATA8Q6RVD6 105 aa3.82□□□□□ -1.8
SPTLC1P3-201ENST00000403408 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
SPTLC1P3-201ENST00000403408 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
SPTLC1P3-201ENST00000403408 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
SPTLC1P3-201ENST00000403408 SCGB1A1P11684 91 aa3.74□□□□□ -1.81
SPTLC1P3-201ENST00000403408 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
SPTLC1P3-201ENST00000403408 TNP1P09430 55 aa3.67□□□□□ -1.82
SPTLC1P3-201ENST00000403408 MT3P25713 68 aa3.66□□□□□ -1.82
SPTLC1P3-201ENST00000403408 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
SPTLC1P3-201ENST00000403408 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
SPTLC1P3-201ENST00000403408 A0A1B0GU33 70 aa3.64□□□□□ -1.83
SPTLC1P3-201ENST00000403408 PCP4L1A6NKN8 68 aa3.62□□□□□ -1.83
SPTLC1P3-201ENST00000403408 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
SPTLC1P3-201ENST00000403408 A8MU10 97 aa3.61□□□□□ -1.83
SPTLC1P3-201ENST00000403408 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
SPTLC1P3-201ENST00000403408 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
SPTLC1P3-201ENST00000403408 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
SPTLC1P3-201ENST00000403408 COA5Q86WW8 74 aa3.57□□□□□ -1.84
SPTLC1P3-201ENST00000403408 MT1AP04731 61 aa3.54□□□□□ -1.84
SPTLC1P3-201ENST00000403408 SEC61GP60059 68 aa3.54□□□□□ -1.84
SPTLC1P3-201ENST00000403408 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SPTLC1P3-201ENST00000403408 SMIM20Q8N5G0 67 aa3.5□□□□□ -1.85
SPTLC1P3-201ENST00000403408 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
SPTLC1P3-201ENST00000403408 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
SPTLC1P3-201ENST00000403408 A0A1B0GV90 55 aa3.42□□□□□ -1.86
SPTLC1P3-201ENST00000403408 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
SPTLC1P3-201ENST00000403408 J3QR89 54 aa3.38□□□□□ -1.87
SPTLC1P3-201ENST00000403408 A0A1B0GU69 56 aa3.33□□□□□ -1.88
SPTLC1P3-201ENST00000403408 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
SPTLC1P3-201ENST00000403408 SERP2Q8N6R1 65 aa3.31□□□□□ -1.88
SPTLC1P3-201ENST00000403408 H7BZZ5 65 aa3.19□□□□□ -1.9
SPTLC1P3-201ENST00000403408 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
SPTLC1P3-201ENST00000403408 K7ERU9 68 aa3.08□□□□□ -1.92
SPTLC1P3-201ENST00000403408 COX7CP15954 63 aa3.08□□□□□ -1.92
SPTLC1P3-201ENST00000403408 PRR15LQ9BU68 103 aa3.06□□□□□ -1.92
SPTLC1P3-201ENST00000403408 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
SPTLC1P3-201ENST00000403408 UQCR11O14957 56 aa2.96□□□□□ -1.94
SPTLC1P3-201ENST00000403408 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SPTLC1P3-201ENST00000403408 MIR22HGQ0VDD5 57 aa2.89□□□□□ -1.95
SPTLC1P3-201ENST00000403408 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
SPTLC1P3-201ENST00000403408 K7ERS5 55 aa2.79□□□□□ -1.96
SPTLC1P3-201ENST00000403408 RPS28P62857 69 aaKnown RBP2.77□□□□□ -1.97
SPTLC1P3-201ENST00000403408 CCDC179H3BU77 68 aa2.76□□□□□ -1.97
SPTLC1P3-201ENST00000403408 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
SPTLC1P3-201ENST00000403408 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
SPTLC1P3-201ENST00000403408 Q1T7F1 81 aa2.68□□□□□ -1.98
SPTLC1P3-201ENST00000403408 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
SPTLC1P3-201ENST00000403408 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
SPTLC1P3-201ENST00000403408 ROMO1P60602 79 aa2.63□□□□□ -1.99
SPTLC1P3-201ENST00000403408 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
SPTLC1P3-201ENST00000403408 PSPHP1O15172 72 aa2.61□□□□□ -1.99
SPTLC1P3-201ENST00000403408 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
SPTLC1P3-201ENST00000403408 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
SPTLC1P3-201ENST00000403408 TMEM258P61165 79 aa2.5□□□□□ -2.01
SPTLC1P3-201ENST00000403408 PCP4P48539 62 aa2.47□□□□□ -2.01
SPTLC1P3-201ENST00000403408 A6NED7 52 aa2.42□□□□□ -2.02
SPTLC1P3-201ENST00000403408 V9GYY9 64 aa2.39□□□□□ -2.03
SPTLC1P3-201ENST00000403408 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SPTLC1P3-201ENST00000403408 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
SPTLC1P3-201ENST00000403408 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
SPTLC1P3-201ENST00000403408 PRAC1Q96KF2 57 aa2.1□□□□□ -2.07
SPTLC1P3-201ENST00000403408 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
SPTLC1P3-201ENST00000403408 SVIPQ8NHG7 77 aa1.67□□□□□ -2.14
SPTLC1P3-201ENST00000403408 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
SPTLC1P3-201ENST00000403408 BRK1Q8WUW1 75 aa1.51□□□□□ -2.17
SPTLC1P3-201ENST00000403408 PRM1P04553 51 aa1.36□□□□□ -2.19
SPTLC1P3-201ENST00000403408 PMAIP1Q13794 54 aa1.36□□□□□ -2.19
SPTLC1P3-201ENST00000403408 LUZP6Q538Z0 58 aa1.22□□□□□ -2.21
SPTLC1P3-201ENST00000403408 KTN1-AS1Q86SY8 53 aa0.89□□□□□ -2.27
SPTLC1P3-201ENST00000403408 PRO0628Q9UI54 55 aa0.77□□□□□ -2.29
SPTLC1P3-201ENST00000403408 INE1O15225 51 aa0.19□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 100.2 ms