RNA–Protein interactions for RNA: ENST00000397006.2

PRKAA1-203, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 3

Gene PRKAA1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-203ENST00000397006 MT1EP04732 61 aa3.31□□□□□ -1.88
PRKAA1-203ENST00000397006 TNP1P09430 55 aa3.31□□□□□ -1.88
PRKAA1-203ENST00000397006 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
PRKAA1-203ENST00000397006 CYSTM1Q9H1C7 97 aa3.31□□□□□ -1.88
PRKAA1-203ENST00000397006 MT1GP13640 62 aa3.28□□□□□ -1.88
PRKAA1-203ENST00000397006 A8MU10 97 aa3.26□□□□□ -1.89
PRKAA1-203ENST00000397006 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
PRKAA1-203ENST00000397006 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
PRKAA1-203ENST00000397006 A0A0A0MQY5 61 aa3.23□□□□□ -1.89
PRKAA1-203ENST00000397006 CCDC179H3BU77 68 aa3.23□□□□□ -1.89
PRKAA1-203ENST00000397006 UQCR11O14957 56 aa3.23□□□□□ -1.89
PRKAA1-203ENST00000397006 PCP4P48539 62 aa3.23□□□□□ -1.89
PRKAA1-203ENST00000397006 TMEM258P61165 79 aa3.21□□□□□ -1.9
PRKAA1-203ENST00000397006 SVIPQ8NHG7 77 aa3.21□□□□□ -1.9
PRKAA1-203ENST00000397006 K7ERS5 55 aa3.19□□□□□ -1.9
PRKAA1-203ENST00000397006 C10orf95Q9H7T3 257 aa3.19□□□□□ -1.9
PRKAA1-203ENST00000397006 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
PRKAA1-203ENST00000397006 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
PRKAA1-203ENST00000397006 LCE3AQ5TA76 89 aa3.17□□□□□ -1.9
PRKAA1-203ENST00000397006 MT1LQ93083 61 aa3.16□□□□□ -1.9
PRKAA1-203ENST00000397006 MT1MQ8N339 61 aa3.15□□□□□ -1.91
PRKAA1-203ENST00000397006 MT3P25713 68 aa3.14□□□□□ -1.91
PRKAA1-203ENST00000397006 V9GYY9 64 aa3.13□□□□□ -1.91
PRKAA1-203ENST00000397006 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
PRKAA1-203ENST00000397006 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
PRKAA1-203ENST00000397006 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
PRKAA1-203ENST00000397006 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
PRKAA1-203ENST00000397006 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
PRKAA1-203ENST00000397006 MT4P47944 62 aa3.06□□□□□ -1.92
PRKAA1-203ENST00000397006 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
PRKAA1-203ENST00000397006 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
PRKAA1-203ENST00000397006 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
PRKAA1-203ENST00000397006 PSPHP1O15172 72 aa3□□□□□ -1.93
PRKAA1-203ENST00000397006 Q1T7F1 81 aa3□□□□□ -1.93
PRKAA1-203ENST00000397006 A6NED7 52 aa2.96□□□□□ -1.94
PRKAA1-203ENST00000397006 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
PRKAA1-203ENST00000397006 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
PRKAA1-203ENST00000397006 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
PRKAA1-203ENST00000397006 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
PRKAA1-203ENST00000397006 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
PRKAA1-203ENST00000397006 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
PRKAA1-203ENST00000397006 RPS28P62857 69 aaKnown RBP2.88□□□□□ -1.95
PRKAA1-203ENST00000397006 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
PRKAA1-203ENST00000397006 ROMO1P60602 79 aa2.85□□□□□ -1.95
PRKAA1-203ENST00000397006 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
PRKAA1-203ENST00000397006 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
PRKAA1-203ENST00000397006 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
PRKAA1-203ENST00000397006 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
PRKAA1-203ENST00000397006 MT1AP04731 61 aa2.72□□□□□ -1.97
PRKAA1-203ENST00000397006 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
PRKAA1-203ENST00000397006 SYNE1Q8NF91 8797 aaKnown RBP2.68□□□□□ -1.98
PRKAA1-203ENST00000397006 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
PRKAA1-203ENST00000397006 NDUFAF8A1L188 74 aa2.65□□□□□ -1.99
PRKAA1-203ENST00000397006 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
PRKAA1-203ENST00000397006 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
PRKAA1-203ENST00000397006 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
PRKAA1-203ENST00000397006 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
PRKAA1-203ENST00000397006 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
PRKAA1-203ENST00000397006 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
PRKAA1-203ENST00000397006 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
PRKAA1-203ENST00000397006 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
PRKAA1-203ENST00000397006 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
PRKAA1-203ENST00000397006 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
PRKAA1-203ENST00000397006 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
PRKAA1-203ENST00000397006 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
PRKAA1-203ENST00000397006 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
PRKAA1-203ENST00000397006 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
PRKAA1-203ENST00000397006 PRO0628Q9UI54 55 aa2.12□□□□□ -2.07
PRKAA1-203ENST00000397006 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
PRKAA1-203ENST00000397006 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
PRKAA1-203ENST00000397006 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
PRKAA1-203ENST00000397006 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
PRKAA1-203ENST00000397006 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
PRKAA1-203ENST00000397006 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
PRKAA1-203ENST00000397006 PRM1P04553 51 aa1.42□□□□□ -2.18
PRKAA1-203ENST00000397006 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
PRKAA1-203ENST00000397006 INE1O15225 51 aa1.25□□□□□ -2.21
PRKAA1-203ENST00000397006 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 10.6 ms