RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
DDR1-229ENST00000396342 HMCN1Q96RW7 5635 aa5.71□□□□□ -1.5
DDR1-229ENST00000396342 TMEM258P61165 79 aa5.7□□□□□ -1.5
DDR1-229ENST00000396342 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
DDR1-229ENST00000396342 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
DDR1-229ENST00000396342 LINC01558Q9Y6Z2 57 aa5.59□□□□□ -1.51
DDR1-229ENST00000396342 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
DDR1-229ENST00000396342 AHNAK2Q8IVF2 5795 aa5.57□□□□□ -1.52
DDR1-229ENST00000396342 KRTAP4-6Q9BYQ5 205 aa5.53□□□□□ -1.52
DDR1-229ENST00000396342 UQCR11O14957 56 aa5.51□□□□□ -1.53
DDR1-229ENST00000396342 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
DDR1-229ENST00000396342 K7ERS5 55 aa5.47□□□□□ -1.53
DDR1-229ENST00000396342 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
DDR1-229ENST00000396342 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
DDR1-229ENST00000396342 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
DDR1-229ENST00000396342 V9GYY9 64 aa5.38□□□□□ -1.55
DDR1-229ENST00000396342 PCP4P48539 62 aa5.37□□□□□ -1.55
DDR1-229ENST00000396342 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
DDR1-229ENST00000396342 PSPHP1O15172 72 aa5.36□□□□□ -1.55
DDR1-229ENST00000396342 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
DDR1-229ENST00000396342 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
DDR1-229ENST00000396342 Q1T7F1 81 aa5.34□□□□□ -1.55
DDR1-229ENST00000396342 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
DDR1-229ENST00000396342 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
DDR1-229ENST00000396342 KRTAP5-7Q6L8G8 165 aa5.33□□□□□ -1.56
DDR1-229ENST00000396342 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
DDR1-229ENST00000396342 RPS28P62857 69 aaKnown RBP5.22□□□□□ -1.57
DDR1-229ENST00000396342 A6NED7 52 aa5.19□□□□□ -1.58
DDR1-229ENST00000396342 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
DDR1-229ENST00000396342 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
DDR1-229ENST00000396342 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
DDR1-229ENST00000396342 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
DDR1-229ENST00000396342 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
DDR1-229ENST00000396342 CDC42SE1Q9NRR8 79 aa5.04□□□□□ -1.6
DDR1-229ENST00000396342 MT1AP04731 61 aa4.95□□□□□ -1.62
DDR1-229ENST00000396342 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
DDR1-229ENST00000396342 ROMO1P60602 79 aa4.89□□□□□ -1.63
DDR1-229ENST00000396342 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
DDR1-229ENST00000396342 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
DDR1-229ENST00000396342 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
DDR1-229ENST00000396342 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
DDR1-229ENST00000396342 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
DDR1-229ENST00000396342 KRTAP5-8O75690 187 aa4.72□□□□□ -1.65
DDR1-229ENST00000396342 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
DDR1-229ENST00000396342 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
DDR1-229ENST00000396342 BRK1Q8WUW1 75 aa4.66□□□□□ -1.66
DDR1-229ENST00000396342 KRTAP9-6A8MVA2 160 aa4.64□□□□□ -1.67
DDR1-229ENST00000396342 MUC5BQ9HC84 5762 aaPredicted RBP4.63□□□□□ -1.67
DDR1-229ENST00000396342 MT3P25713 68 aa4.62□□□□□ -1.67
DDR1-229ENST00000396342 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
DDR1-229ENST00000396342 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
DDR1-229ENST00000396342 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
DDR1-229ENST00000396342 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
DDR1-229ENST00000396342 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
DDR1-229ENST00000396342 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
DDR1-229ENST00000396342 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
DDR1-229ENST00000396342 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
DDR1-229ENST00000396342 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
DDR1-229ENST00000396342 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
DDR1-229ENST00000396342 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
DDR1-229ENST00000396342 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
DDR1-229ENST00000396342 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
DDR1-229ENST00000396342 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
DDR1-229ENST00000396342 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
DDR1-229ENST00000396342 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
DDR1-229ENST00000396342 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
DDR1-229ENST00000396342 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
DDR1-229ENST00000396342 PHGR1C9JFL3 82 aa3.3□□□□□ -1.88
DDR1-229ENST00000396342 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
DDR1-229ENST00000396342 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
DDR1-229ENST00000396342 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
DDR1-229ENST00000396342 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
DDR1-229ENST00000396342 H3BS24 57 aa2.84□□□□□ -1.95
DDR1-229ENST00000396342 A0A0A0MQY5 61 aa2.66□□□□□ -1.98
DDR1-229ENST00000396342 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
DDR1-229ENST00000396342 PRM1P04553 51 aa2.52□□□□□ -2.01
DDR1-229ENST00000396342 INE1O15225 51 aa2.48□□□□□ -2.01
DDR1-229ENST00000396342 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 118.1 ms