RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
SMARCAD1-203ENST00000394961 MT1GP13640 62 aa2.32□□□□□ -2.04
SMARCAD1-203ENST00000394961 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
SMARCAD1-203ENST00000394961 H7BZZ5 65 aa2.27□□□□□ -2.05
SMARCAD1-203ENST00000394961 LINC01554Q52M75 96 aa2.27□□□□□ -2.05
SMARCAD1-203ENST00000394961 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
SMARCAD1-203ENST00000394961 KRTAP13-4Q3LI77 160 aa2.26□□□□□ -2.05
SMARCAD1-203ENST00000394961 ATP5EP56381 51 aaPredicted RBP2.26□□□□□ -2.05
SMARCAD1-203ENST00000394961 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
SMARCAD1-203ENST00000394961 MT1MQ8N339 61 aa2.24□□□□□ -2.05
SMARCAD1-203ENST00000394961 MT1LQ93083 61 aa2.23□□□□□ -2.05
SMARCAD1-203ENST00000394961 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
SMARCAD1-203ENST00000394961 DSTQ03001 7570 aaKnown RBP2.23□□□□□ -2.05
SMARCAD1-203ENST00000394961 SERP2Q8N6R1 65 aa2.22□□□□□ -2.05
SMARCAD1-203ENST00000394961 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
SMARCAD1-203ENST00000394961 KRTAP23-1A1A580 65 aa2.22□□□□□ -2.05
SMARCAD1-203ENST00000394961 CHKB-CPT1BH3BT56 60 aa2.22□□□□□ -2.05
SMARCAD1-203ENST00000394961 KRTAP19-5Q3LI72 72 aa2.21□□□□□ -2.06
SMARCAD1-203ENST00000394961 CAMK2N1Q7Z7J9 78 aa2.21□□□□□ -2.06
SMARCAD1-203ENST00000394961 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
SMARCAD1-203ENST00000394961 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
SMARCAD1-203ENST00000394961 A0A0D9SG42 100 aa2.18□□□□□ -2.06
SMARCAD1-203ENST00000394961 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
SMARCAD1-203ENST00000394961 COA5Q86WW8 74 aa2.14□□□□□ -2.07
SMARCAD1-203ENST00000394961 A8MU10 97 aa2.13□□□□□ -2.07
SMARCAD1-203ENST00000394961 A0A1B0GU33 70 aa2.12□□□□□ -2.07
SMARCAD1-203ENST00000394961 ROMO1P60602 79 aa2.12□□□□□ -2.07
SMARCAD1-203ENST00000394961 MT4P47944 62 aa2.11□□□□□ -2.07
SMARCAD1-203ENST00000394961 CDC42SE1Q9NRR8 79 aa2.11□□□□□ -2.07
SMARCAD1-203ENST00000394961 KRTAP20-2Q3LI61 65 aa2.1□□□□□ -2.07
SMARCAD1-203ENST00000394961 SNURFQ9Y675 71 aa2.1□□□□□ -2.07
SMARCAD1-203ENST00000394961 TNP1P09430 55 aa2.09□□□□□ -2.07
SMARCAD1-203ENST00000394961 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
SMARCAD1-203ENST00000394961 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
SMARCAD1-203ENST00000394961 SPATA8Q6RVD6 105 aa2.06□□□□□ -2.08
SMARCAD1-203ENST00000394961 KRTAP15-1Q3LI76 137 aa2.05□□□□□ -2.08
SMARCAD1-203ENST00000394961 KRTAP4-3Q9BYR4 195 aa2.05□□□□□ -2.08
SMARCAD1-203ENST00000394961 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
SMARCAD1-203ENST00000394961 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
SMARCAD1-203ENST00000394961 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
SMARCAD1-203ENST00000394961 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
SMARCAD1-203ENST00000394961 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
SMARCAD1-203ENST00000394961 A0A1B0GU69 56 aa2.01□□□□□ -2.09
SMARCAD1-203ENST00000394961 KRTAP25-1Q3LHN0 102 aa1.99□□□□□ -2.09
SMARCAD1-203ENST00000394961 PRR15LQ9BU68 103 aa1.98□□□□□ -2.09
SMARCAD1-203ENST00000394961 LINC01558Q9Y6Z2 57 aa1.97□□□□□ -2.09
SMARCAD1-203ENST00000394961 PRAC1Q96KF2 57 aa1.97□□□□□ -2.09
SMARCAD1-203ENST00000394961 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
SMARCAD1-203ENST00000394961 MT1AP04731 61 aa1.94□□□□□ -2.1
SMARCAD1-203ENST00000394961 KRTAP5-8O75690 187 aa1.9□□□□□ -2.1
SMARCAD1-203ENST00000394961 LCE3CQ5T5A8 94 aa1.9□□□□□ -2.11
SMARCAD1-203ENST00000394961 MIR22HGQ0VDD5 57 aa1.89□□□□□ -2.11
SMARCAD1-203ENST00000394961 UQCR11O14957 56 aa1.88□□□□□ -2.11
SMARCAD1-203ENST00000394961 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
SMARCAD1-203ENST00000394961 K7ERS5 55 aa1.81□□□□□ -2.12
SMARCAD1-203ENST00000394961 NDUFAF8A1L188 74 aa1.8□□□□□ -2.12
SMARCAD1-203ENST00000394961 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.13
SMARCAD1-203ENST00000394961 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
SMARCAD1-203ENST00000394961 A6NED7 52 aa1.76□□□□□ -2.13
SMARCAD1-203ENST00000394961 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
SMARCAD1-203ENST00000394961 MT3P25713 68 aa1.75□□□□□ -2.13
SMARCAD1-203ENST00000394961 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
SMARCAD1-203ENST00000394961 LCE1EQ5T753 118 aa1.74□□□□□ -2.13
SMARCAD1-203ENST00000394961 INE1O15225 51 aa1.69□□□□□ -2.14
SMARCAD1-203ENST00000394961 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
SMARCAD1-203ENST00000394961 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
SMARCAD1-203ENST00000394961 LCE1CQ5T751 118 aa1.59□□□□□ -2.16
SMARCAD1-203ENST00000394961 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.16
SMARCAD1-203ENST00000394961 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
SMARCAD1-203ENST00000394961 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SMARCAD1-203ENST00000394961 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
SMARCAD1-203ENST00000394961 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
SMARCAD1-203ENST00000394961 KRTAP21-2Q3LI59 83 aa1.27□□□□□ -2.21
SMARCAD1-203ENST00000394961 LCE3EQ5T5B0 92 aa1.23□□□□□ -2.21
SMARCAD1-203ENST00000394961 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
SMARCAD1-203ENST00000394961 MUC19Q7Z5P9 8384 aa0.91□□□□□ -2.26
SMARCAD1-203ENST00000394961 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
SMARCAD1-203ENST00000394961 PRM1P04553 51 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms