RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 PP632Q6XCG6 107 aa0.66□□□□□ -2.3
SNORA40.18-201ENST00000391200 MT1MQ8N339 61 aa0.66□□□□□ -2.3
SNORA40.18-201ENST00000391200 TRAV7A0A075B6U4 112 aa0.65□□□□□ -2.31
SNORA40.18-201ENST00000391200 COL5A1-AS1Q5SY13 56 aa0.65□□□□□ -2.31
SNORA40.18-201ENST00000391200 GTF2H5Q6ZYL4 71 aa0.65□□□□□ -2.31
SNORA40.18-201ENST00000391200 SPTSSBQ8NFR3 76 aa0.65□□□□□ -2.31
SNORA40.18-201ENST00000391200 LOC105371267A0A1B0GV96 52 aa0.64□□□□□ -2.31
SNORA40.18-201ENST00000391200 MT1LQ93083 61 aa0.64□□□□□ -2.31
SNORA40.18-201ENST00000391200 OCR1Q9BZK8 76 aa0.64□□□□□ -2.31
SNORA40.18-201ENST00000391200 C10orf95Q9H7T3 257 aa0.64□□□□□ -2.31
SNORA40.18-201ENST00000391200 KRTAP12-4P60329 112 aa0.63□□□□□ -2.31
SNORA40.18-201ENST00000391200 LINC00643Q86TS7 51 aa0.63□□□□□ -2.31
SNORA40.18-201ENST00000391200 DMAC1Q96GE9 116 aa0.63□□□□□ -2.31
SNORA40.18-201ENST00000391200 SNURFQ9Y675 71 aa0.63□□□□□ -2.31
SNORA40.18-201ENST00000391200 SERP1Q9Y6X1 66 aa0.63□□□□□ -2.31
SNORA40.18-201ENST00000391200 A0A1B0GU33 70 aa0.62□□□□□ -2.31
SNORA40.18-201ENST00000391200 A8MU10 97 aa0.62□□□□□ -2.31
SNORA40.18-201ENST00000391200 SMIM6P0DI80 62 aa0.62□□□□□ -2.31
SNORA40.18-201ENST00000391200 SEC61GP60059 68 aa0.62□□□□□ -2.31
SNORA40.18-201ENST00000391200 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
SNORA40.18-201ENST00000391200 KRTAP12-1P59990 96 aa0.61□□□□□ -2.31
SNORA40.18-201ENST00000391200 H3BPC8 53 aa0.6□□□□□ -2.31
SNORA40.18-201ENST00000391200 TNP1P09430 55 aa0.6□□□□□ -2.31
SNORA40.18-201ENST00000391200 KRTAP12-3P60328 96 aa0.6□□□□□ -2.31
SNORA40.18-201ENST00000391200 ATP5EP2Q5VTU8 51 aa0.6□□□□□ -2.31
SNORA40.18-201ENST00000391200 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.31
SNORA40.18-201ENST00000391200 A0A1B0GV90 55 aa0.59□□□□□ -2.31
SNORA40.18-201ENST00000391200 SERP2Q8N6R1 65 aa0.59□□□□□ -2.31
SNORA40.18-201ENST00000391200 COA5Q86WW8 74 aa0.58□□□□□ -2.32
SNORA40.18-201ENST00000391200 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
SNORA40.18-201ENST00000391200 SMIM26A0A096LP01 95 aa0.57□□□□□ -2.32
SNORA40.18-201ENST00000391200 A0A1B0GU69 56 aa0.57□□□□□ -2.32
SNORA40.18-201ENST00000391200 FAM240AA0A1B0GVK7 77 aa0.57□□□□□ -2.32
SNORA40.18-201ENST00000391200 KRTAP6-1Q3LI64 71 aa0.57□□□□□ -2.32
SNORA40.18-201ENST00000391200 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
SNORA40.18-201ENST00000391200 PCP4P48539 62 aa0.56□□□□□ -2.32
SNORA40.18-201ENST00000391200 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
SNORA40.18-201ENST00000391200 J3QR89 54 aa0.55□□□□□ -2.32
SNORA40.18-201ENST00000391200 SMIM20Q8N5G0 67 aa0.55□□□□□ -2.32
SNORA40.18-201ENST00000391200 KRTAP25-1Q3LHN0 102 aa0.54□□□□□ -2.32
SNORA40.18-201ENST00000391200 SPANXA2-OT1Q8N9U9 137 aa0.54□□□□□ -2.32
SNORA40.18-201ENST00000391200 LCE3DQ9BYE3 92 aa0.54□□□□□ -2.32
SNORA40.18-201ENST00000391200 A0A0A0MQY5 61 aa0.53□□□□□ -2.32
SNORA40.18-201ENST00000391200 MT1AP04731 61 aa0.53□□□□□ -2.32
SNORA40.18-201ENST00000391200 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.33
SNORA40.18-201ENST00000391200 NDUFAF8A1L188 74 aa0.52□□□□□ -2.33
SNORA40.18-201ENST00000391200 PRR15LQ9BU68 103 aa0.51□□□□□ -2.33
SNORA40.18-201ENST00000391200 H7BZZ5 65 aa0.5□□□□□ -2.33
SNORA40.18-201ENST00000391200 K7ERU9 68 aa0.5□□□□□ -2.33
SNORA40.18-201ENST00000391200 RPS28P62857 69 aaKnown RBP0.5□□□□□ -2.33
SNORA40.18-201ENST00000391200 K7ERS5 55 aa0.49□□□□□ -2.33
SNORA40.18-201ENST00000391200 UQCR11O14957 56 aa0.49□□□□□ -2.33
SNORA40.18-201ENST00000391200 COX7CP15954 63 aa0.49□□□□□ -2.33
SNORA40.18-201ENST00000391200 MIR22HGQ0VDD5 57 aa0.49□□□□□ -2.33
SNORA40.18-201ENST00000391200 PSPHP1O15172 72 aa0.48□□□□□ -2.33
SNORA40.18-201ENST00000391200 LINC01558Q9Y6Z2 57 aa0.48□□□□□ -2.33
SNORA40.18-201ENST00000391200 CCDC179H3BU77 68 aa0.47□□□□□ -2.33
SNORA40.18-201ENST00000391200 PRAC1Q96KF2 57 aa0.47□□□□□ -2.33
SNORA40.18-201ENST00000391200 Q1T7F1 81 aa0.46□□□□□ -2.34
SNORA40.18-201ENST00000391200 ANAPC13Q9BS18 74 aa0.46□□□□□ -2.34
SNORA40.18-201ENST00000391200 ROMO1P60602 79 aa0.44□□□□□ -2.34
SNORA40.18-201ENST00000391200 CDC42SE1Q9NRR8 79 aa0.44□□□□□ -2.34
SNORA40.18-201ENST00000391200 A6NED7 52 aa0.43□□□□□ -2.34
SNORA40.18-201ENST00000391200 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
SNORA40.18-201ENST00000391200 SVIPQ8NHG7 77 aa0.42□□□□□ -2.34
SNORA40.18-201ENST00000391200 ATP5EP56381 51 aaPredicted RBP0.39□□□□□ -2.35
SNORA40.18-201ENST00000391200 TMEM258P61165 79 aa0.39□□□□□ -2.35
SNORA40.18-201ENST00000391200 V9GYY9 64 aa0.39□□□□□ -2.35
SNORA40.18-201ENST00000391200 MUC16Q8WXI7 14507 aa0.36□□□□□ -2.35
SNORA40.18-201ENST00000391200 BRK1Q8WUW1 75 aa0.3□□□□□ -2.36
SNORA40.18-201ENST00000391200 PMAIP1Q13794 54 aa0.29□□□□□ -2.36
SNORA40.18-201ENST00000391200 KRTAP21-1Q3LI58 79 aa0.29□□□□□ -2.36
SNORA40.18-201ENST00000391200 LUZP6Q538Z0 58 aa0.25□□□□□ -2.37
SNORA40.18-201ENST00000391200 PRM1P04553 51 aa0.24□□□□□ -2.37
SNORA40.18-201ENST00000391200 KTN1-AS1Q86SY8 53 aa0.13□□□□□ -2.39
SNORA40.18-201ENST00000391200 PRO0628Q9UI54 55 aa0.13□□□□□ -2.39
SNORA40.18-201ENST00000391200 INE1O15225 51 aa0.04□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms