RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 CENPEQ02224 2701 aa-3.36□□□□□ -2.95
RNU6-541P-201ENST00000384709 CLTCL1P53675 1640 aa-3.38□□□□□ -2.95
RNU6-541P-201ENST00000384709 MUC3AQ02505 3323 aa-3.39□□□□□ -2.95
RNU6-541P-201ENST00000384709 NRXN3Q9Y4C0 1643 aa-3.39□□□□□ -2.95
RNU6-541P-201ENST00000384709 IQGAP1P46940 1657 aa-3.4□□□□□ -2.95
RNU6-541P-201ENST00000384709 SCRIBQ14160 1630 aa-3.42□□□□□ -2.96
RNU6-541P-201ENST00000384709 TFF3Q07654 80 aa-3.47□□□□□ -2.96
RNU6-541P-201ENST00000384709 USP34Q70CQ2 3546 aa-3.48□□□□□ -2.97
RNU6-541P-201ENST00000384709 CPS1P31327 1500 aa-3.48□□□□□ -2.97
RNU6-541P-201ENST00000384709 XIRP2A4UGR9 3374 aa-3.49□□□□□ -2.97
RNU6-541P-201ENST00000384709 DNAH12Q6ZR08 3092 aa-3.5□□□□□ -2.97
RNU6-541P-201ENST00000384709 TRPM2O94759 1503 aa-3.5□□□□□ -2.97
RNU6-541P-201ENST00000384709 MKI67P46013 3256 aaKnown RBP-3.52□□□□□ -2.97
RNU6-541P-201ENST00000384709 PLNP26678 52 aa-3.53□□□□□ -2.97
RNU6-541P-201ENST00000384709 A0A087WWC5 75 aa-3.54□□□□□ -2.98
RNU6-541P-201ENST00000384709 DNAH14Q0VDD8 3507 aa-3.54□□□□□ -2.98
RNU6-541P-201ENST00000384709 SMIM2Q9BVW6 85 aa-3.55□□□□□ -2.98
RNU6-541P-201ENST00000384709 UNC80Q8N2C7 3258 aa-3.56□□□□□ -2.98
RNU6-541P-201ENST00000384709 NFAT5O94916 1531 aa-3.56□□□□□ -2.98
RNU6-541P-201ENST00000384709 CFAP47Q6ZTR5 3102 aa-3.58□□□□□ -2.98
RNU6-541P-201ENST00000384709 ADCY10Q96PN6 1610 aa-3.6□□□□□ -2.99
RNU6-541P-201ENST00000384709 PRXQ9BXM0 1461 aa-3.64□□□□□ -2.99
RNU6-541P-201ENST00000384709 ABCC8Q09428 1581 aa-3.65□□□□□ -2.99
RNU6-541P-201ENST00000384709 FANCD2Q9BXW9 1451 aa-3.7□□□□□ -3
RNU6-541P-201ENST00000384709 LOC400499M0QZD8 3231 aa-3.71□□□□□ -3
RNU6-541P-201ENST00000384709 SMIM5Q71RC9 77 aa-3.76□□□□□ -3.01
RNU6-541P-201ENST00000384709 NDUFA1O15239 70 aa-3.79□□□□□ -3.02
RNU6-541P-201ENST00000384709 TTTY10Q9BZA0 68 aa-3.8□□□□□ -3.02
RNU6-541P-201ENST00000384709 CMC2Q9NRP2 79 aa-3.83□□□□□ -3.02
RNU6-541P-201ENST00000384709 ASPMQ8IZT6 3477 aa-3.85□□□□□ -3.03
RNU6-541P-201ENST00000384709 LINC01590Q5TEZ4 76 aa-3.86□□□□□ -3.03
RNU6-541P-201ENST00000384709 RHPN1-AS1Q9BWJ2 59 aa-3.86□□□□□ -3.03
RNU6-541P-201ENST00000384709 DEFB133Q30KQ1 61 aa-3.88□□□□□ -3.03
RNU6-541P-201ENST00000384709 TOMM7Q9P0U1 55 aa-3.93□□□□□ -3.04
RNU6-541P-201ENST00000384709 KRTAP19-2Q3LHN2 52 aa-3.94□□□□□ -3.04
RNU6-541P-201ENST00000384709 DUOX1Q9NRD9 1551 aa-3.98□□□□□ -3.05
RNU6-541P-201ENST00000384709 VCANP13611 3396 aa-3.99□□□□□ -3.05
RNU6-541P-201ENST00000384709 BRCA2P51587 3418 aa-4□□□□□ -3.05
RNU6-541P-201ENST00000384709 ERICH3Q5RHP9 1530 aa-4.01□□□□□ -3.05
RNU6-541P-201ENST00000384709 CENPFP49454 3210 aa-4.03□□□□□ -3.05
RNU6-541P-201ENST00000384709 SAMD9LQ8IVG5 1584 aa-4.09□□□□□ -3.06
RNU6-541P-201ENST00000384709 HTN1P15515 57 aa-4.09□□□□□ -3.06
RNU6-541P-201ENST00000384709 CD52P31358 61 aa-4.09□□□□□ -3.06
RNU6-541P-201ENST00000384709 A0A096LNI7 61 aa-4.1□□□□□ -3.07
RNU6-541P-201ENST00000384709 CDH23Q9H251 3354 aa-4.14□□□□□ -3.07
RNU6-541P-201ENST00000384709 DEFB124Q8NES8 71 aa-4.15□□□□□ -3.07
RNU6-541P-201ENST00000384709 TOP2AP11388 1531 aaKnown RBP-4.18□□□□□ -3.08
RNU6-541P-201ENST00000384709 VPS13AQ96RL7 3174 aa-4.23□□□□□ -3.09
RNU6-541P-201ENST00000384709 SMIM31A0A1B0GVY4 71 aa-4.24□□□□□ -3.09
RNU6-541P-201ENST00000384709 RPL39P62891 51 aaKnown RBP-4.24□□□□□ -3.09
RNU6-541P-201ENST00000384709 MROH2BQ7Z745 1585 aa-4.25□□□□□ -3.09
RNU6-541P-201ENST00000384709 ATP7AQ04656 1500 aa-4.3□□□□□ -3.1
RNU6-541P-201ENST00000384709 IQGAP2Q13576 1575 aa-4.36□□□□□ -3.11
RNU6-541P-201ENST00000384709 RPL39LQ96EH5 51 aaKnown RBP-4.4□□□□□ -3.11
RNU6-541P-201ENST00000384709 SNRPGP15A8MWD9 76 aa-4.42□□□□□ -3.12
RNU6-541P-201ENST00000384709 H3BUX3 64 aa-4.59□□□□□ -3.14
RNU6-541P-201ENST00000384709 UTRNP46939 3433 aa-4.59□□□□□ -3.14
RNU6-541P-201ENST00000384709 LINC01556Q5JQF7 62 aa-4.6□□□□□ -3.15
RNU6-541P-201ENST00000384709 DEFB104AQ8WTQ1 72 aa-4.6□□□□□ -3.15
RNU6-541P-201ENST00000384709 TOMM5Q8N4H5 51 aa-4.74□□□□□ -3.17
RNU6-541P-201ENST00000384709 K7EIM0 57 aa-4.87□□□□□ -3.19
RNU6-541P-201ENST00000384709 GCC2Q8IWJ2 1684 aa-5.02□□□□□ -3.21
RNU6-541P-201ENST00000384709 ARHGAP5-AS1Q96IT6 56 aa-5.09□□□□□ -3.22
RNU6-541P-201ENST00000384709 APELAP0DMC3 54 aa-5.1□□□□□ -3.23
RNU6-541P-201ENST00000384709 A0A096LPF7 62 aa-5.11□□□□□ -3.23
RNU6-541P-201ENST00000384709 PRCDQ00LT1 54 aa-5.15□□□□□ -3.23
RNU6-541P-201ENST00000384709 TMEM167AQ8TBQ9 72 aa-5.25□□□□□ -3.25
RNU6-541P-201ENST00000384709 GOLGB1Q14789 3259 aaKnown RBP-5.28□□□□□ -3.26
RNU6-541P-201ENST00000384709 HTN3P15516 51 aa-5.44□□□□□ -3.28
RNU6-541P-201ENST00000384709 SNRPGP62308 76 aaKnown RBP-5.44□□□□□ -3.28
RNU6-541P-201ENST00000384709 Q9Y3F1 56 aa-5.56□□□□□ -3.3
RNU6-541P-201ENST00000384709 RPL39P5Q59GN2 51 aa-5.6□□□□□ -3.31
RNU6-541P-201ENST00000384709 DEFB108AA8MXU0 73 aa-5.73□□□□□ -3.33
RNU6-541P-201ENST00000384709 H3BSH0 61 aa-5.82□□□□□ -3.34
RNU6-541P-201ENST00000384709 COX14Q96I36 57 aa-5.97□□□□□ -3.37
RNU6-541P-201ENST00000384709 DEFB108BQ8NET1 73 aa-6.25□□□□□ -3.41
RNU6-541P-201ENST00000384709 STATHP02808 62 aa-6.99□□□□□ -3.53
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms