RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KRTAP4-9Q9BYQ8 210 aa7.89□□□□□ -1.15
COL9A2-201ENST00000372736 KRTAP4-3Q9BYR4 195 aa7.85□□□□□ -1.15
COL9A2-201ENST00000372736 KRTAP12-3P60328 96 aa7.84□□□□□ -1.15
COL9A2-201ENST00000372736 PSPHP1O15172 72 aa7.83□□□□□ -1.16
COL9A2-201ENST00000372736 V9GYY9 64 aa7.83□□□□□ -1.16
COL9A2-201ENST00000372736 Q1T7F1 81 aa7.81□□□□□ -1.16
COL9A2-201ENST00000372736 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
COL9A2-201ENST00000372736 PCP4P48539 62 aa7.75□□□□□ -1.17
COL9A2-201ENST00000372736 K7ERS5 55 aa7.74□□□□□ -1.17
COL9A2-201ENST00000372736 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
COL9A2-201ENST00000372736 LCE4AQ5TA78 99 aa7.74□□□□□ -1.17
COL9A2-201ENST00000372736 KRTAP4-7Q9BYR0 210 aa7.7□□□□□ -1.18
COL9A2-201ENST00000372736 MT4P47944 62 aa7.64□□□□□ -1.19
COL9A2-201ENST00000372736 KRTAP5-4Q6L8H1 288 aa7.64□□□□□ -1.19
COL9A2-201ENST00000372736 HMCN1Q96RW7 5635 aa7.58□□□□□ -1.2
COL9A2-201ENST00000372736 GPR98Q8WXG9 6306 aa7.55□□□□□ -1.2
COL9A2-201ENST00000372736 A6NED7 52 aa7.55□□□□□ -1.2
COL9A2-201ENST00000372736 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
COL9A2-201ENST00000372736 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
COL9A2-201ENST00000372736 RPS28P62857 69 aaKnown RBP7.41□□□□□ -1.22
COL9A2-201ENST00000372736 KRTAP5-5Q701N2 237 aaPredicted RBP7.4□□□□□ -1.22
COL9A2-201ENST00000372736 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
COL9A2-201ENST00000372736 CDC42SE1Q9NRR8 79 aa7.37□□□□□ -1.23
COL9A2-201ENST00000372736 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
COL9A2-201ENST00000372736 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
COL9A2-201ENST00000372736 ROMO1P60602 79 aa7.26□□□□□ -1.25
COL9A2-201ENST00000372736 AHNAK2Q8IVF2 5795 aa7.25□□□□□ -1.25
COL9A2-201ENST00000372736 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
COL9A2-201ENST00000372736 KRTAP20-2Q3LI61 65 aa7.2□□□□□ -1.26
COL9A2-201ENST00000372736 KRTAP5-10Q6L8G5 202 aa7.17□□□□□ -1.26
COL9A2-201ENST00000372736 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
COL9A2-201ENST00000372736 KRTAP12-4P60329 112 aa7.12□□□□□ -1.27
COL9A2-201ENST00000372736 KRTAP5-3Q6L8H2 238 aa7.01□□□□□ -1.29
COL9A2-201ENST00000372736 SYNE1Q8NF91 8797 aaKnown RBP6.98□□□□□ -1.29
COL9A2-201ENST00000372736 MT1AP04731 61 aa6.88□□□□□ -1.31
COL9A2-201ENST00000372736 KRTAP5-7Q6L8G8 165 aa6.87□□□□□ -1.31
COL9A2-201ENST00000372736 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
COL9A2-201ENST00000372736 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
COL9A2-201ENST00000372736 KRTAP5-2Q701N4 177 aa6.72□□□□□ -1.33
COL9A2-201ENST00000372736 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
COL9A2-201ENST00000372736 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
COL9A2-201ENST00000372736 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
COL9A2-201ENST00000372736 KRTAP6-2Q3LI66 62 aa6.52□□□□□ -1.37
COL9A2-201ENST00000372736 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
COL9A2-201ENST00000372736 MT3P25713 68 aa6.26□□□□□ -1.41
COL9A2-201ENST00000372736 PMAIP1Q13794 54 aa6.2□□□□□ -1.42
COL9A2-201ENST00000372736 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
COL9A2-201ENST00000372736 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
COL9A2-201ENST00000372736 KRTAP5-1Q6L8H4 278 aa6.01□□□□□ -1.45
COL9A2-201ENST00000372736 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
COL9A2-201ENST00000372736 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
COL9A2-201ENST00000372736 MUC5ACP98088 5654 aa5.94□□□□□ -1.46
COL9A2-201ENST00000372736 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
COL9A2-201ENST00000372736 AHNAKQ09666 5890 aaKnown RBP5.89□□□□□ -1.47
COL9A2-201ENST00000372736 LCE1EQ5T753 118 aa5.75□□□□□ -1.49
COL9A2-201ENST00000372736 KTN1-AS1Q86SY8 53 aa5.74□□□□□ -1.49
COL9A2-201ENST00000372736 KRTAP4-2Q9BYR5 136 aa5.46□□□□□ -1.54
COL9A2-201ENST00000372736 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
COL9A2-201ENST00000372736 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
COL9A2-201ENST00000372736 LCE1CQ5T751 118 aa5.34□□□□□ -1.55
COL9A2-201ENST00000372736 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
COL9A2-201ENST00000372736 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
COL9A2-201ENST00000372736 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
COL9A2-201ENST00000372736 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.89□□□□□ -1.63
COL9A2-201ENST00000372736 KRTAP4-12Q9BQ66 201 aa4.89□□□□□ -1.63
COL9A2-201ENST00000372736 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
COL9A2-201ENST00000372736 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
COL9A2-201ENST00000372736 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
COL9A2-201ENST00000372736 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
COL9A2-201ENST00000372736 PHGR1C9JFL3 82 aa4.18□□□□□ -1.74
COL9A2-201ENST00000372736 KRTAP4-4Q9BYR3 166 aa4.11□□□□□ -1.75
COL9A2-201ENST00000372736 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
COL9A2-201ENST00000372736 PRM1P04553 51 aa3.73□□□□□ -1.81
COL9A2-201ENST00000372736 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
COL9A2-201ENST00000372736 INE1O15225 51 aa3.58□□□□□ -1.84
COL9A2-201ENST00000372736 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
COL9A2-201ENST00000372736 H3BS24 57 aa2.8□□□□□ -1.96
COL9A2-201ENST00000372736 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 8.9 ms