RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 A8MU10 97 aa4.5□□□□□ -1.69
H3F3A-203ENST00000366815 ACYP2P14621 99 aa4.47□□□□□ -1.69
H3F3A-203ENST00000366815 Q1T7F1 81 aa4.44□□□□□ -1.7
H3F3A-203ENST00000366815 V9GYY9 64 aa4.44□□□□□ -1.7
H3F3A-203ENST00000366815 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
H3F3A-203ENST00000366815 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
H3F3A-203ENST00000366815 SPTSSBQ8NFR3 76 aa4.42□□□□□ -1.7
H3F3A-203ENST00000366815 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
H3F3A-203ENST00000366815 SPRR2DP22532 72 aa4.39□□□□□ -1.71
H3F3A-203ENST00000366815 COA5Q86WW8 74 aa4.38□□□□□ -1.71
H3F3A-203ENST00000366815 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
H3F3A-203ENST00000366815 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
H3F3A-203ENST00000366815 PSPHP1O15172 72 aa4.35□□□□□ -1.71
H3F3A-203ENST00000366815 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
H3F3A-203ENST00000366815 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
H3F3A-203ENST00000366815 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
H3F3A-203ENST00000366815 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
H3F3A-203ENST00000366815 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
H3F3A-203ENST00000366815 A6NED7 52 aa4.24□□□□□ -1.73
H3F3A-203ENST00000366815 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
H3F3A-203ENST00000366815 KRTAP19-7Q3SYF9 63 aa4.19□□□□□ -1.74
H3F3A-203ENST00000366815 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
H3F3A-203ENST00000366815 A0A1B0GU69 56 aa4.17□□□□□ -1.74
H3F3A-203ENST00000366815 MT1EP04732 61 aa4.15□□□□□ -1.75
H3F3A-203ENST00000366815 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
H3F3A-203ENST00000366815 DSTQ03001 7570 aaKnown RBP4.13□□□□□ -1.75
H3F3A-203ENST00000366815 A0A0D9SG42 100 aa4.13□□□□□ -1.75
H3F3A-203ENST00000366815 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
H3F3A-203ENST00000366815 SEC61GP60059 68 aa4.12□□□□□ -1.75
H3F3A-203ENST00000366815 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
H3F3A-203ENST00000366815 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
H3F3A-203ENST00000366815 A0A1B0GU33 70 aa4.09□□□□□ -1.75
H3F3A-203ENST00000366815 UQCR11O14957 56 aa4.08□□□□□ -1.76
H3F3A-203ENST00000366815 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
H3F3A-203ENST00000366815 SPINT4Q6UDR6 99 aa4.07□□□□□ -1.76
H3F3A-203ENST00000366815 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
H3F3A-203ENST00000366815 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
H3F3A-203ENST00000366815 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
H3F3A-203ENST00000366815 MT1GP13640 62 aa4.02□□□□□ -1.77
H3F3A-203ENST00000366815 GPR98Q8WXG9 6306 aa3.98□□□□□ -1.77
H3F3A-203ENST00000366815 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
H3F3A-203ENST00000366815 MT1MQ8N339 61 aa3.95□□□□□ -1.78
H3F3A-203ENST00000366815 MT1LQ93083 61 aa3.95□□□□□ -1.78
H3F3A-203ENST00000366815 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
H3F3A-203ENST00000366815 KRTAP5-5Q701N2 237 aaPredicted RBP3.89□□□□□ -1.79
H3F3A-203ENST00000366815 K7ERS5 55 aa3.88□□□□□ -1.79
H3F3A-203ENST00000366815 TNP1P09430 55 aa3.88□□□□□ -1.79
H3F3A-203ENST00000366815 MT4P47944 62 aa3.87□□□□□ -1.79
H3F3A-203ENST00000366815 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
H3F3A-203ENST00000366815 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
H3F3A-203ENST00000366815 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
H3F3A-203ENST00000366815 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
H3F3A-203ENST00000366815 ROMO1P60602 79 aa3.72□□□□□ -1.81
H3F3A-203ENST00000366815 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
H3F3A-203ENST00000366815 KRTAP5-10Q6L8G5 202 aa3.7□□□□□ -1.82
H3F3A-203ENST00000366815 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
H3F3A-203ENST00000366815 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
H3F3A-203ENST00000366815 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
H3F3A-203ENST00000366815 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
H3F3A-203ENST00000366815 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
H3F3A-203ENST00000366815 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
H3F3A-203ENST00000366815 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
H3F3A-203ENST00000366815 KRTAP5-8O75690 187 aa3.44□□□□□ -1.86
H3F3A-203ENST00000366815 MT1AP04731 61 aa3.36□□□□□ -1.87
H3F3A-203ENST00000366815 KRTAP6-1Q3LI64 71 aa3.34□□□□□ -1.87
H3F3A-203ENST00000366815 KRTAP6-2Q3LI66 62 aa3.2□□□□□ -1.9
H3F3A-203ENST00000366815 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
H3F3A-203ENST00000366815 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
H3F3A-203ENST00000366815 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
H3F3A-203ENST00000366815 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
H3F3A-203ENST00000366815 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
H3F3A-203ENST00000366815 INE1O15225 51 aa2.75□□□□□ -1.97
H3F3A-203ENST00000366815 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
H3F3A-203ENST00000366815 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
H3F3A-203ENST00000366815 PRM1P04553 51 aa1.95□□□□□ -2.1
H3F3A-203ENST00000366815 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
H3F3A-203ENST00000366815 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms