RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 TRAV7A0A075B6U4 112 aa1.93□□□□□ -2.1
RNU4-4P-201ENST00000364588 KRTAP19-7Q3SYF9 63 aa1.92□□□□□ -2.1
RNU4-4P-201ENST00000364588 MT1EP04732 61 aa1.91□□□□□ -2.1
RNU4-4P-201ENST00000364588 SCGB1A1P11684 91 aa1.91□□□□□ -2.1
RNU4-4P-201ENST00000364588 ACYP2P14621 99 aa1.91□□□□□ -2.1
RNU4-4P-201ENST00000364588 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
RNU4-4P-201ENST00000364588 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
RNU4-4P-201ENST00000364588 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
RNU4-4P-201ENST00000364588 SPTSSBQ8NFR3 76 aa1.9□□□□□ -2.11
RNU4-4P-201ENST00000364588 CHKB-CPT1BH3BT56 60 aa1.89□□□□□ -2.11
RNU4-4P-201ENST00000364588 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
RNU4-4P-201ENST00000364588 MT4P47944 62 aa1.88□□□□□ -2.11
RNU4-4P-201ENST00000364588 CYSTM1Q9H1C7 97 aa1.88□□□□□ -2.11
RNU4-4P-201ENST00000364588 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
RNU4-4P-201ENST00000364588 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
RNU4-4P-201ENST00000364588 A0A0D9SG42 100 aa1.85□□□□□ -2.11
RNU4-4P-201ENST00000364588 MT1GP13640 62 aa1.85□□□□□ -2.11
RNU4-4P-201ENST00000364588 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
RNU4-4P-201ENST00000364588 A0A1B0GV90 55 aa1.83□□□□□ -2.12
RNU4-4P-201ENST00000364588 MT1MQ8N339 61 aa1.83□□□□□ -2.12
RNU4-4P-201ENST00000364588 AHNAK2Q8IVF2 5795 aa1.82□□□□□ -2.12
RNU4-4P-201ENST00000364588 J3QR89 54 aa1.82□□□□□ -2.12
RNU4-4P-201ENST00000364588 SPINT4Q6UDR6 99 aa1.82□□□□□ -2.12
RNU4-4P-201ENST00000364588 SNURFQ9Y675 71 aa1.82□□□□□ -2.12
RNU4-4P-201ENST00000364588 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
RNU4-4P-201ENST00000364588 MT1LQ93083 61 aa1.81□□□□□ -2.12
RNU4-4P-201ENST00000364588 SPATA8Q6RVD6 105 aa1.8□□□□□ -2.12
RNU4-4P-201ENST00000364588 SMIM20Q8N5G0 67 aa1.8□□□□□ -2.12
RNU4-4P-201ENST00000364588 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
RNU4-4P-201ENST00000364588 SPANXA2-OT1Q8N9U9 137 aa1.78□□□□□ -2.12
RNU4-4P-201ENST00000364588 SEC61GP60059 68 aa1.77□□□□□ -2.13
RNU4-4P-201ENST00000364588 COA5Q86WW8 74 aa1.77□□□□□ -2.13
RNU4-4P-201ENST00000364588 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
RNU4-4P-201ENST00000364588 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
RNU4-4P-201ENST00000364588 A0A1B0GU33 70 aa1.75□□□□□ -2.13
RNU4-4P-201ENST00000364588 SERP2Q8N6R1 65 aa1.72□□□□□ -2.13
RNU4-4P-201ENST00000364588 TNP1P09430 55 aa1.71□□□□□ -2.14
RNU4-4P-201ENST00000364588 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
RNU4-4P-201ENST00000364588 K7ERU9 68 aa1.7□□□□□ -2.14
RNU4-4P-201ENST00000364588 SMIM26A0A096LP01 95 aa1.69□□□□□ -2.14
RNU4-4P-201ENST00000364588 A0A1B0GU69 56 aa1.67□□□□□ -2.14
RNU4-4P-201ENST00000364588 H7BZZ5 65 aa1.64□□□□□ -2.15
RNU4-4P-201ENST00000364588 COX7CP15954 63 aa1.63□□□□□ -2.15
RNU4-4P-201ENST00000364588 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
RNU4-4P-201ENST00000364588 PRR15LQ9BU68 103 aa1.57□□□□□ -2.16
RNU4-4P-201ENST00000364588 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
RNU4-4P-201ENST00000364588 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
RNU4-4P-201ENST00000364588 LINC01558Q9Y6Z2 57 aa1.54□□□□□ -2.16
RNU4-4P-201ENST00000364588 MT1AP04731 61 aa1.53□□□□□ -2.16
RNU4-4P-201ENST00000364588 UQCR11O14957 56 aa1.52□□□□□ -2.17
RNU4-4P-201ENST00000364588 ANAPC13Q9BS18 74 aa1.51□□□□□ -2.17
RNU4-4P-201ENST00000364588 CCDC179H3BU77 68 aa1.5□□□□□ -2.17
RNU4-4P-201ENST00000364588 KRTAP6-2Q3LI66 62 aa1.5□□□□□ -2.17
RNU4-4P-201ENST00000364588 MUC5ACP98088 5654 aa1.5□□□□□ -2.17
RNU4-4P-201ENST00000364588 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
RNU4-4P-201ENST00000364588 ATP5EP56381 51 aaPredicted RBP1.49□□□□□ -2.17
RNU4-4P-201ENST00000364588 MIR22HGQ0VDD5 57 aa1.49□□□□□ -2.17
RNU4-4P-201ENST00000364588 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
RNU4-4P-201ENST00000364588 K7ERS5 55 aa1.47□□□□□ -2.17
RNU4-4P-201ENST00000364588 LUZP6Q538Z0 58 aa1.46□□□□□ -2.18
RNU4-4P-201ENST00000364588 PSPHP1O15172 72 aa1.41□□□□□ -2.18
RNU4-4P-201ENST00000364588 TMEM258P61165 79 aa1.41□□□□□ -2.18
RNU4-4P-201ENST00000364588 RPS28P62857 69 aaKnown RBP1.39□□□□□ -2.19
RNU4-4P-201ENST00000364588 CDC42SE1Q9NRR8 79 aa1.38□□□□□ -2.19
RNU4-4P-201ENST00000364588 Q1T7F1 81 aa1.37□□□□□ -2.19
RNU4-4P-201ENST00000364588 ROMO1P60602 79 aa1.36□□□□□ -2.19
RNU4-4P-201ENST00000364588 A6NED7 52 aa1.35□□□□□ -2.19
RNU4-4P-201ENST00000364588 V9GYY9 64 aa1.35□□□□□ -2.19
RNU4-4P-201ENST00000364588 PRO0628Q9UI54 55 aa1.1□□□□□ -2.23
RNU4-4P-201ENST00000364588 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
RNU4-4P-201ENST00000364588 BRK1Q8WUW1 75 aa1.02□□□□□ -2.25
RNU4-4P-201ENST00000364588 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
RNU4-4P-201ENST00000364588 PMAIP1Q13794 54 aa0.94□□□□□ -2.26
RNU4-4P-201ENST00000364588 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
RNU4-4P-201ENST00000364588 KTN1-AS1Q86SY8 53 aa0.73□□□□□ -2.29
RNU4-4P-201ENST00000364588 PRM1P04553 51 aa0.7□□□□□ -2.3
RNU4-4P-201ENST00000364588 INE1O15225 51 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 85.4 ms