RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 R4GN34 69 aa3.78□□□□□ -1.8
UBE2D3-202ENST00000338145 COA5Q86WW8 74 aa3.77□□□□□ -1.81
UBE2D3-202ENST00000338145 M0QZ58 72 aa3.74□□□□□ -1.81
UBE2D3-202ENST00000338145 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
UBE2D3-202ENST00000338145 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
UBE2D3-202ENST00000338145 ATP5EP56381 51 aaPredicted RBP3.72□□□□□ -1.81
UBE2D3-202ENST00000338145 SEC61GP60059 68 aa3.66□□□□□ -1.82
UBE2D3-202ENST00000338145 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
UBE2D3-202ENST00000338145 TMEM258P61165 79 aa3.65□□□□□ -1.83
UBE2D3-202ENST00000338145 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
UBE2D3-202ENST00000338145 SERP1Q9Y6X1 66 aa3.64□□□□□ -1.83
UBE2D3-202ENST00000338145 LINC01554Q52M75 96 aa3.63□□□□□ -1.83
UBE2D3-202ENST00000338145 RPS28P62857 69 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-202ENST00000338145 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
UBE2D3-202ENST00000338145 A0A1B0GU69 56 aa3.58□□□□□ -1.84
UBE2D3-202ENST00000338145 A0A1B0GU33 70 aa3.57□□□□□ -1.84
UBE2D3-202ENST00000338145 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
UBE2D3-202ENST00000338145 AHNAK2Q8IVF2 5795 aa3.55□□□□□ -1.84
UBE2D3-202ENST00000338145 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
UBE2D3-202ENST00000338145 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
UBE2D3-202ENST00000338145 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
UBE2D3-202ENST00000338145 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
UBE2D3-202ENST00000338145 MT4P47944 62 aa3.51□□□□□ -1.85
UBE2D3-202ENST00000338145 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
UBE2D3-202ENST00000338145 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
UBE2D3-202ENST00000338145 SMIM26A0A096LP01 95 aa3.49□□□□□ -1.85
UBE2D3-202ENST00000338145 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
UBE2D3-202ENST00000338145 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
UBE2D3-202ENST00000338145 A0A0D9SG42 100 aa3.47□□□□□ -1.85
UBE2D3-202ENST00000338145 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
UBE2D3-202ENST00000338145 SPRR5A0A1B0GTR4 108 aa3.45□□□□□ -1.86
UBE2D3-202ENST00000338145 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
UBE2D3-202ENST00000338145 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
UBE2D3-202ENST00000338145 V9GYY9 64 aa3.44□□□□□ -1.86
UBE2D3-202ENST00000338145 MT1EP04732 61 aa3.43□□□□□ -1.86
UBE2D3-202ENST00000338145 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
UBE2D3-202ENST00000338145 PP632Q6XCG6 107 aa3.43□□□□□ -1.86
UBE2D3-202ENST00000338145 UQCR11O14957 56 aa3.42□□□□□ -1.86
UBE2D3-202ENST00000338145 SPINT4Q6UDR6 99 aa3.42□□□□□ -1.86
UBE2D3-202ENST00000338145 MT1GP13640 62 aa3.41□□□□□ -1.86
UBE2D3-202ENST00000338145 Q1T7F1 81 aa3.4□□□□□ -1.87
UBE2D3-202ENST00000338145 MIR22HGQ0VDD5 57 aa3.33□□□□□ -1.88
UBE2D3-202ENST00000338145 PSPHP1O15172 72 aa3.31□□□□□ -1.88
UBE2D3-202ENST00000338145 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
UBE2D3-202ENST00000338145 MT1MQ8N339 61 aa3.29□□□□□ -1.88
UBE2D3-202ENST00000338145 TNP1P09430 55 aa3.28□□□□□ -1.88
UBE2D3-202ENST00000338145 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
UBE2D3-202ENST00000338145 K7ERS5 55 aa3.26□□□□□ -1.89
UBE2D3-202ENST00000338145 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
UBE2D3-202ENST00000338145 KRTAP19-5Q3LI72 72 aa3.24□□□□□ -1.89
UBE2D3-202ENST00000338145 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
UBE2D3-202ENST00000338145 A6NED7 52 aa3.23□□□□□ -1.89
UBE2D3-202ENST00000338145 KRTAP20-2Q3LI61 65 aa3.21□□□□□ -1.9
UBE2D3-202ENST00000338145 MT1LQ93083 61 aa3.21□□□□□ -1.9
UBE2D3-202ENST00000338145 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
UBE2D3-202ENST00000338145 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.91
UBE2D3-202ENST00000338145 KRTAP12-4P60329 112 aa3.13□□□□□ -1.91
UBE2D3-202ENST00000338145 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
UBE2D3-202ENST00000338145 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
UBE2D3-202ENST00000338145 ROMO1P60602 79 aa3.05□□□□□ -1.92
UBE2D3-202ENST00000338145 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
UBE2D3-202ENST00000338145 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
UBE2D3-202ENST00000338145 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
UBE2D3-202ENST00000338145 MUC5ACP98088 5654 aa3□□□□□ -1.93
UBE2D3-202ENST00000338145 MUC5BQ9HC84 5762 aaPredicted RBP2.97□□□□□ -1.93
UBE2D3-202ENST00000338145 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
UBE2D3-202ENST00000338145 MT1AP04731 61 aa2.75□□□□□ -1.97
UBE2D3-202ENST00000338145 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
UBE2D3-202ENST00000338145 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
UBE2D3-202ENST00000338145 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
UBE2D3-202ENST00000338145 LUZP6Q538Z0 58 aa2.45□□□□□ -2.02
UBE2D3-202ENST00000338145 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
UBE2D3-202ENST00000338145 PHGR1C9JFL3 82 aa2.09□□□□□ -2.07
UBE2D3-202ENST00000338145 INE1O15225 51 aa2.05□□□□□ -2.08
UBE2D3-202ENST00000338145 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
UBE2D3-202ENST00000338145 PRM1P04553 51 aa1.55□□□□□ -2.16
UBE2D3-202ENST00000338145 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms