RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 CCDC179H3BU77 68 aa5.65□□□□□ -1.5
CTHRC1-201ENST00000330295 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.5
CTHRC1-201ENST00000330295 A0A1B0GU69 56 aa5.64□□□□□ -1.51
CTHRC1-201ENST00000330295 A0A0D9SG42 100 aa5.6□□□□□ -1.51
CTHRC1-201ENST00000330295 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
CTHRC1-201ENST00000330295 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
CTHRC1-201ENST00000330295 PRR15LQ9BU68 103 aa5.56□□□□□ -1.52
CTHRC1-201ENST00000330295 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
CTHRC1-201ENST00000330295 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
CTHRC1-201ENST00000330295 TMEM258P61165 79 aa5.52□□□□□ -1.53
CTHRC1-201ENST00000330295 MT1EP04732 61 aa5.51□□□□□ -1.53
CTHRC1-201ENST00000330295 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
CTHRC1-201ENST00000330295 KRTAP12-1P59990 96 aa5.44□□□□□ -1.54
CTHRC1-201ENST00000330295 LINC01558Q9Y6Z2 57 aa5.43□□□□□ -1.54
CTHRC1-201ENST00000330295 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
CTHRC1-201ENST00000330295 MT1GP13640 62 aa5.4□□□□□ -1.54
CTHRC1-201ENST00000330295 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
CTHRC1-201ENST00000330295 A8MU10 97 aa5.38□□□□□ -1.55
CTHRC1-201ENST00000330295 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
CTHRC1-201ENST00000330295 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
CTHRC1-201ENST00000330295 UQCR11O14957 56 aa5.33□□□□□ -1.56
CTHRC1-201ENST00000330295 KRTAP5-11Q6L8G4 156 aa5.33□□□□□ -1.56
CTHRC1-201ENST00000330295 MT1MQ8N339 61 aa5.31□□□□□ -1.56
CTHRC1-201ENST00000330295 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
CTHRC1-201ENST00000330295 V9GYY9 64 aa5.27□□□□□ -1.57
CTHRC1-201ENST00000330295 TNP1P09430 55 aa5.25□□□□□ -1.57
CTHRC1-201ENST00000330295 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
CTHRC1-201ENST00000330295 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
CTHRC1-201ENST00000330295 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
CTHRC1-201ENST00000330295 K7ERS5 55 aa5.2□□□□□ -1.58
CTHRC1-201ENST00000330295 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
CTHRC1-201ENST00000330295 C10orf95Q9H7T3 257 aa5.18□□□□□ -1.58
CTHRC1-201ENST00000330295 Q1T7F1 81 aa5.15□□□□□ -1.59
CTHRC1-201ENST00000330295 PSPHP1O15172 72 aa5.14□□□□□ -1.59
CTHRC1-201ENST00000330295 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
CTHRC1-201ENST00000330295 MT1LQ93083 61 aa5.1□□□□□ -1.59
CTHRC1-201ENST00000330295 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
CTHRC1-201ENST00000330295 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
CTHRC1-201ENST00000330295 KRTAP5-8O75690 187 aa5.04□□□□□ -1.6
CTHRC1-201ENST00000330295 A6NED7 52 aa5.03□□□□□ -1.6
CTHRC1-201ENST00000330295 LCE1EQ5T753 118 aa5.02□□□□□ -1.61
CTHRC1-201ENST00000330295 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
CTHRC1-201ENST00000330295 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
CTHRC1-201ENST00000330295 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
CTHRC1-201ENST00000330295 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
CTHRC1-201ENST00000330295 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
CTHRC1-201ENST00000330295 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
CTHRC1-201ENST00000330295 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
CTHRC1-201ENST00000330295 ROMO1P60602 79 aa4.76□□□□□ -1.65
CTHRC1-201ENST00000330295 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
CTHRC1-201ENST00000330295 KRTAP4-4Q9BYR3 166 aa4.76□□□□□ -1.65
CTHRC1-201ENST00000330295 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
CTHRC1-201ENST00000330295 MT3P25713 68 aa4.68□□□□□ -1.66
CTHRC1-201ENST00000330295 BRK1Q8WUW1 75 aa4.62□□□□□ -1.67
CTHRC1-201ENST00000330295 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
CTHRC1-201ENST00000330295 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
CTHRC1-201ENST00000330295 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
CTHRC1-201ENST00000330295 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
CTHRC1-201ENST00000330295 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
CTHRC1-201ENST00000330295 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
CTHRC1-201ENST00000330295 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CTHRC1-201ENST00000330295 MT1AP04731 61 aa4.32□□□□□ -1.72
CTHRC1-201ENST00000330295 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
CTHRC1-201ENST00000330295 PRAC1Q96KF2 57 aa3.96□□□□□ -1.78
CTHRC1-201ENST00000330295 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
CTHRC1-201ENST00000330295 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
CTHRC1-201ENST00000330295 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
CTHRC1-201ENST00000330295 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
CTHRC1-201ENST00000330295 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
CTHRC1-201ENST00000330295 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
CTHRC1-201ENST00000330295 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
CTHRC1-201ENST00000330295 INE1O15225 51 aa3.01□□□□□ -1.93
CTHRC1-201ENST00000330295 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
CTHRC1-201ENST00000330295 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
CTHRC1-201ENST00000330295 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
CTHRC1-201ENST00000330295 PRM1P04553 51 aa2.41□□□□□ -2.02
CTHRC1-201ENST00000330295 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 110.5 ms