RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 TNP1P09430 55 aa3.67□□□□□ -1.82
SMIM4-201ENST00000307106 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
SMIM4-201ENST00000307106 SEC61GP60059 68 aa3.6□□□□□ -1.83
SMIM4-201ENST00000307106 SERP1Q9Y6X1 66 aa3.58□□□□□ -1.84
SMIM4-201ENST00000307106 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
SMIM4-201ENST00000307106 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SMIM4-201ENST00000307106 A0A1B0GU33 70 aa3.53□□□□□ -1.84
SMIM4-201ENST00000307106 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
SMIM4-201ENST00000307106 MT1AP04731 61 aa3.51□□□□□ -1.85
SMIM4-201ENST00000307106 SPANXA2-OT1Q8N9U9 137 aa3.5□□□□□ -1.85
SMIM4-201ENST00000307106 SMIM26A0A096LP01 95 aa3.48□□□□□ -1.85
SMIM4-201ENST00000307106 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
SMIM4-201ENST00000307106 SMIM20Q8N5G0 67 aa3.48□□□□□ -1.85
SMIM4-201ENST00000307106 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
SMIM4-201ENST00000307106 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
SMIM4-201ENST00000307106 A8MU10 97 aa3.43□□□□□ -1.86
SMIM4-201ENST00000307106 LOC105371267A0A1B0GV96 52 aa3.42□□□□□ -1.86
SMIM4-201ENST00000307106 SNURFQ9Y675 71 aa3.42□□□□□ -1.86
SMIM4-201ENST00000307106 COA5Q86WW8 74 aa3.39□□□□□ -1.87
SMIM4-201ENST00000307106 H3BS24 57 aa3.36□□□□□ -1.87
SMIM4-201ENST00000307106 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
SMIM4-201ENST00000307106 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SMIM4-201ENST00000307106 J3QR89 54 aa3.32□□□□□ -1.88
SMIM4-201ENST00000307106 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
SMIM4-201ENST00000307106 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
SMIM4-201ENST00000307106 A0A1B0GU69 56 aa3.24□□□□□ -1.89
SMIM4-201ENST00000307106 PCP4L1A6NKN8 68 aa3.24□□□□□ -1.89
SMIM4-201ENST00000307106 MT3P25713 68 aa3.23□□□□□ -1.89
SMIM4-201ENST00000307106 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
SMIM4-201ENST00000307106 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
SMIM4-201ENST00000307106 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
SMIM4-201ENST00000307106 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
SMIM4-201ENST00000307106 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
SMIM4-201ENST00000307106 H7BZZ5 65 aa3.08□□□□□ -1.92
SMIM4-201ENST00000307106 A0A1B0GV90 55 aa3.04□□□□□ -1.92
SMIM4-201ENST00000307106 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SMIM4-201ENST00000307106 UQCR11O14957 56 aa2.91□□□□□ -1.94
SMIM4-201ENST00000307106 K7ERS5 55 aa2.9□□□□□ -1.95
SMIM4-201ENST00000307106 K7ERU9 68 aa2.9□□□□□ -1.95
SMIM4-201ENST00000307106 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SMIM4-201ENST00000307106 COX7CP15954 63 aa2.85□□□□□ -1.95
SMIM4-201ENST00000307106 LINC01558Q9Y6Z2 57 aa2.83□□□□□ -1.96
SMIM4-201ENST00000307106 RPS28P62857 69 aaKnown RBP2.81□□□□□ -1.96
SMIM4-201ENST00000307106 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
SMIM4-201ENST00000307106 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
SMIM4-201ENST00000307106 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
SMIM4-201ENST00000307106 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
SMIM4-201ENST00000307106 ATP5EP56381 51 aaPredicted RBP2.67□□□□□ -1.98
SMIM4-201ENST00000307106 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
SMIM4-201ENST00000307106 Q1T7F1 81 aa2.55□□□□□ -2
SMIM4-201ENST00000307106 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SMIM4-201ENST00000307106 ROMO1P60602 79 aa2.52□□□□□ -2.01
SMIM4-201ENST00000307106 ANAPC13Q9BS18 74 aa2.45□□□□□ -2.02
SMIM4-201ENST00000307106 V9GYY9 64 aa2.41□□□□□ -2.02
SMIM4-201ENST00000307106 CCDC179H3BU77 68 aa2.4□□□□□ -2.03
SMIM4-201ENST00000307106 PSPHP1O15172 72 aa2.39□□□□□ -2.03
SMIM4-201ENST00000307106 TMEM258P61165 79 aa2.35□□□□□ -2.03
SMIM4-201ENST00000307106 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SMIM4-201ENST00000307106 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SMIM4-201ENST00000307106 A6NED7 52 aa2.29□□□□□ -2.04
SMIM4-201ENST00000307106 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SMIM4-201ENST00000307106 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SMIM4-201ENST00000307106 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SMIM4-201ENST00000307106 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
SMIM4-201ENST00000307106 A0A0A0MQY5 61 aa1.96□□□□□ -2.1
SMIM4-201ENST00000307106 PCP4P48539 62 aa1.93□□□□□ -2.1
SMIM4-201ENST00000307106 SVIPQ8NHG7 77 aa1.93□□□□□ -2.1
SMIM4-201ENST00000307106 NDUFAF8A1L188 74 aa1.6□□□□□ -2.15
SMIM4-201ENST00000307106 PRAC1Q96KF2 57 aa1.59□□□□□ -2.15
SMIM4-201ENST00000307106 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
SMIM4-201ENST00000307106 BRK1Q8WUW1 75 aa1.54□□□□□ -2.16
SMIM4-201ENST00000307106 LUZP6Q538Z0 58 aa1.31□□□□□ -2.2
SMIM4-201ENST00000307106 PRM1P04553 51 aa1.26□□□□□ -2.21
SMIM4-201ENST00000307106 PMAIP1Q13794 54 aa1.23□□□□□ -2.21
SMIM4-201ENST00000307106 PRO0628Q9UI54 55 aa1.04□□□□□ -2.24
SMIM4-201ENST00000307106 KTN1-AS1Q86SY8 53 aa0.96□□□□□ -2.26
SMIM4-201ENST00000307106 INE1O15225 51 aa0.59□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 133.8 ms