RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
HCFC1R1-201ENST00000248089 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
HCFC1R1-201ENST00000248089 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
HCFC1R1-201ENST00000248089 PSPHP1O15172 72 aa7.26□□□□□ -1.25
HCFC1R1-201ENST00000248089 K7ERS5 55 aa7.25□□□□□ -1.25
HCFC1R1-201ENST00000248089 LCE4AQ5TA78 99 aa7.25□□□□□ -1.25
HCFC1R1-201ENST00000248089 V9GYY9 64 aa7.24□□□□□ -1.25
HCFC1R1-201ENST00000248089 MT4P47944 62 aa7.22□□□□□ -1.25
HCFC1R1-201ENST00000248089 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
HCFC1R1-201ENST00000248089 Q1T7F1 81 aa7.18□□□□□ -1.26
HCFC1R1-201ENST00000248089 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
HCFC1R1-201ENST00000248089 GPR98Q8WXG9 6306 aa7.15□□□□□ -1.26
HCFC1R1-201ENST00000248089 HMCN1Q96RW7 5635 aa7.13□□□□□ -1.27
HCFC1R1-201ENST00000248089 KRTAP5-4Q6L8H1 288 aa7.1□□□□□ -1.27
HCFC1R1-201ENST00000248089 PCP4P48539 62 aa7.04□□□□□ -1.28
HCFC1R1-201ENST00000248089 A6NED7 52 aa7.02□□□□□ -1.29
HCFC1R1-201ENST00000248089 KRTAP4-6Q9BYQ5 205 aa6.98□□□□□ -1.29
HCFC1R1-201ENST00000248089 KRTAP23-1A1A580 65 aa6.88□□□□□ -1.31
HCFC1R1-201ENST00000248089 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
HCFC1R1-201ENST00000248089 AHNAK2Q8IVF2 5795 aa6.84□□□□□ -1.31
HCFC1R1-201ENST00000248089 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
HCFC1R1-201ENST00000248089 KRTAP15-1Q3LI76 137 aa6.82□□□□□ -1.32
HCFC1R1-201ENST00000248089 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
HCFC1R1-201ENST00000248089 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
HCFC1R1-201ENST00000248089 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
HCFC1R1-201ENST00000248089 ROMO1P60602 79 aa6.74□□□□□ -1.33
HCFC1R1-201ENST00000248089 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
HCFC1R1-201ENST00000248089 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
HCFC1R1-201ENST00000248089 KRTAP5-10Q6L8G5 202 aa6.71□□□□□ -1.34
HCFC1R1-201ENST00000248089 KRTAP12-4P60329 112 aa6.69□□□□□ -1.34
HCFC1R1-201ENST00000248089 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
HCFC1R1-201ENST00000248089 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
HCFC1R1-201ENST00000248089 SYNE1Q8NF91 8797 aaKnown RBP6.56□□□□□ -1.36
HCFC1R1-201ENST00000248089 KRTAP5-7Q6L8G8 165 aa6.44□□□□□ -1.38
HCFC1R1-201ENST00000248089 MT1AP04731 61 aa6.4□□□□□ -1.38
HCFC1R1-201ENST00000248089 KRTAP6-1Q3LI64 71 aa6.37□□□□□ -1.39
HCFC1R1-201ENST00000248089 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
HCFC1R1-201ENST00000248089 KRTAP5-2Q701N4 177 aa6.23□□□□□ -1.41
HCFC1R1-201ENST00000248089 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
HCFC1R1-201ENST00000248089 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
HCFC1R1-201ENST00000248089 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
HCFC1R1-201ENST00000248089 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
HCFC1R1-201ENST00000248089 KRTAP5-8O75690 187 aa5.92□□□□□ -1.46
HCFC1R1-201ENST00000248089 MT3P25713 68 aa5.85□□□□□ -1.47
HCFC1R1-201ENST00000248089 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
HCFC1R1-201ENST00000248089 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
HCFC1R1-201ENST00000248089 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
HCFC1R1-201ENST00000248089 MUC5BQ9HC84 5762 aaPredicted RBP5.61□□□□□ -1.51
HCFC1R1-201ENST00000248089 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
HCFC1R1-201ENST00000248089 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
HCFC1R1-201ENST00000248089 AHNAKQ09666 5890 aaKnown RBP5.57□□□□□ -1.52
HCFC1R1-201ENST00000248089 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
HCFC1R1-201ENST00000248089 PRAC1Q96KF2 57 aa5.47□□□□□ -1.53
HCFC1R1-201ENST00000248089 H3BS24 57 aa5.38□□□□□ -1.55
HCFC1R1-201ENST00000248089 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
HCFC1R1-201ENST00000248089 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
HCFC1R1-201ENST00000248089 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
HCFC1R1-201ENST00000248089 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
HCFC1R1-201ENST00000248089 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
HCFC1R1-201ENST00000248089 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
HCFC1R1-201ENST00000248089 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
HCFC1R1-201ENST00000248089 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
HCFC1R1-201ENST00000248089 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
HCFC1R1-201ENST00000248089 LCE3EQ5T5B0 92 aa4.56□□□□□ -1.68
HCFC1R1-201ENST00000248089 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
HCFC1R1-201ENST00000248089 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
HCFC1R1-201ENST00000248089 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
HCFC1R1-201ENST00000248089 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
HCFC1R1-201ENST00000248089 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
HCFC1R1-201ENST00000248089 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
HCFC1R1-201ENST00000248089 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
HCFC1R1-201ENST00000248089 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
HCFC1R1-201ENST00000248089 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
HCFC1R1-201ENST00000248089 PRM1P04553 51 aa3.47□□□□□ -1.85
HCFC1R1-201ENST00000248089 INE1O15225 51 aa3.21□□□□□ -1.9
HCFC1R1-201ENST00000248089 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
HCFC1R1-201ENST00000248089 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 109.4 ms