RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
FRG1-201ENST00000226798 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
FRG1-201ENST00000226798 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
FRG1-201ENST00000226798 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
FRG1-201ENST00000226798 LCE3AQ5TA76 89 aa3.9□□□□□ -1.79
FRG1-201ENST00000226798 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
FRG1-201ENST00000226798 SPANXA2-OT1Q8N9U9 137 aa3.89□□□□□ -1.79
FRG1-201ENST00000226798 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
FRG1-201ENST00000226798 SMIM20Q8N5G0 67 aa3.88□□□□□ -1.79
FRG1-201ENST00000226798 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
FRG1-201ENST00000226798 SNURFQ9Y675 71 aa3.87□□□□□ -1.79
FRG1-201ENST00000226798 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
FRG1-201ENST00000226798 J3QR89 54 aa3.85□□□□□ -1.79
FRG1-201ENST00000226798 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
FRG1-201ENST00000226798 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
FRG1-201ENST00000226798 SEC61GP60059 68 aa3.81□□□□□ -1.8
FRG1-201ENST00000226798 A0A1B0GU33 70 aa3.8□□□□□ -1.8
FRG1-201ENST00000226798 A0A1B0GV90 55 aa3.79□□□□□ -1.8
FRG1-201ENST00000226798 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
FRG1-201ENST00000226798 COA5Q86WW8 74 aa3.79□□□□□ -1.8
FRG1-201ENST00000226798 TNP1P09430 55 aa3.78□□□□□ -1.8
FRG1-201ENST00000226798 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
FRG1-201ENST00000226798 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
FRG1-201ENST00000226798 SMIM26A0A096LP01 95 aa3.7□□□□□ -1.82
FRG1-201ENST00000226798 A8MU10 97 aa3.69□□□□□ -1.82
FRG1-201ENST00000226798 SVIPQ8NHG7 77 aa3.69□□□□□ -1.82
FRG1-201ENST00000226798 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
FRG1-201ENST00000226798 SERP2Q8N6R1 65 aa3.65□□□□□ -1.83
FRG1-201ENST00000226798 MUC5ACP98088 5654 aa3.65□□□□□ -1.83
FRG1-201ENST00000226798 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
FRG1-201ENST00000226798 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
FRG1-201ENST00000226798 A0A1B0GU69 56 aa3.58□□□□□ -1.84
FRG1-201ENST00000226798 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
FRG1-201ENST00000226798 K7ERU9 68 aa3.56□□□□□ -1.84
FRG1-201ENST00000226798 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
FRG1-201ENST00000226798 H7BZZ5 65 aa3.5□□□□□ -1.85
FRG1-201ENST00000226798 MT1AP04731 61 aa3.47□□□□□ -1.85
FRG1-201ENST00000226798 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
FRG1-201ENST00000226798 COX7CP15954 63 aa3.44□□□□□ -1.86
FRG1-201ENST00000226798 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
FRG1-201ENST00000226798 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
FRG1-201ENST00000226798 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
FRG1-201ENST00000226798 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
FRG1-201ENST00000226798 UQCR11O14957 56 aa3.26□□□□□ -1.89
FRG1-201ENST00000226798 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
FRG1-201ENST00000226798 ATP5EP56381 51 aaPredicted RBP3.16□□□□□ -1.9
FRG1-201ENST00000226798 MIR22HGQ0VDD5 57 aa3.15□□□□□ -1.91
FRG1-201ENST00000226798 K7ERS5 55 aa3.13□□□□□ -1.91
FRG1-201ENST00000226798 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
FRG1-201ENST00000226798 PCP4P48539 62 aa3.11□□□□□ -1.91
FRG1-201ENST00000226798 ANAPC13Q9BS18 74 aa3.11□□□□□ -1.91
FRG1-201ENST00000226798 CCDC179H3BU77 68 aa3.09□□□□□ -1.91
FRG1-201ENST00000226798 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
FRG1-201ENST00000226798 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
FRG1-201ENST00000226798 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
FRG1-201ENST00000226798 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
FRG1-201ENST00000226798 TMEM258P61165 79 aa2.95□□□□□ -1.94
FRG1-201ENST00000226798 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
FRG1-201ENST00000226798 Q1T7F1 81 aa2.93□□□□□ -1.94
FRG1-201ENST00000226798 PSPHP1O15172 72 aa2.91□□□□□ -1.94
FRG1-201ENST00000226798 ROMO1P60602 79 aa2.89□□□□□ -1.95
FRG1-201ENST00000226798 V9GYY9 64 aa2.84□□□□□ -1.95
FRG1-201ENST00000226798 A6NED7 52 aa2.78□□□□□ -1.96
FRG1-201ENST00000226798 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
FRG1-201ENST00000226798 PRAC1Q96KF2 57 aa2.56□□□□□ -2
FRG1-201ENST00000226798 PRO0628Q9UI54 55 aa2.51□□□□□ -2.01
FRG1-201ENST00000226798 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
FRG1-201ENST00000226798 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
FRG1-201ENST00000226798 PMAIP1Q13794 54 aa2.39□□□□□ -2.03
FRG1-201ENST00000226798 BRK1Q8WUW1 75 aa2.36□□□□□ -2.03
FRG1-201ENST00000226798 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
FRG1-201ENST00000226798 KTN1-AS1Q86SY8 53 aa2.26□□□□□ -2.05
FRG1-201ENST00000226798 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
FRG1-201ENST00000226798 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
FRG1-201ENST00000226798 INE1O15225 51 aa1.6□□□□□ -2.15
FRG1-201ENST00000226798 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
FRG1-201ENST00000226798 PRM1P04553 51 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 136 ms