RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Spaca3Q9D9X8 221 aa13.41□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 P01738 130 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 Reg3dQ9QUS9 175 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 Gm4763Q8CFJ5 196 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 C1qtnf5Q8K479 243 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 Adamts20P59511 1906 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 Minos1Q7TNS2 76 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 Fam216aQ9DB54 251 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 CtsbP10605 339 aa13.4□□□□□ -0.26
Ccdc88a-201ENSMUST00000040182 Pcsk5Q04592 1877 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv4-81A0A0G2JEY5 119 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Dand5Q76LW6 185 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Cd59aO55186 123 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 1700001C19RikQ8K168 210 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ighv8-2A0A0A6YW58 119 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Rnf183Q8QZS5 190 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv4-63A0A0G2JFU6 117 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 D930007J09RikQ9D2K6 131 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ndufa3Q9CQ91 84 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Morn5Q9DAI9 170 aa13.39□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Abca2P41234 2434 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Trav14-2A0A075B694 121 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Cd300eQ8K249 196 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv4-72A0A0B4J1I4 117 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv4-61A0A0G2JH00 117 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ndufa4Q62425 82 aaKnown RBP13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 GlrxQ9QUH0 107 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Col4a5Q63ZW6 1691 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Zcwpw2Q08EN7 125 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Gatd1Q8BFQ8 220 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv8-34A0A0G2JDU0 121 aa13.38□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 CrygbP04344 175 aa13.37□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Tmem190Q9D2E9 166 aa13.37□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv19-93A0A0G2JFZ3 115 aa13.37□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv4-59A0A0B4J1I8 117 aa13.37□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Tcl1b4P56844 120 aa13.37□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ighv3-8A0A075B5T0 131 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv20-101-2A0A0G2JDU3 113 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv4-54A0A0G2JES9 117 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Gm15080A2BI02 449 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Leap2Q91V13 76 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ube2e1P52482 193 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 A530064D06RikQ8BNV8 229 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Igkv9-123A0A140T8N8 117 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Lmo1Q924W9 156 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Rhno1Q8K3A4 235 aa13.36□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Rpl35aO55142 110 aa13.35□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Sptbn4E9PX29 2561 aa13.35□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Col5a3Q9JLI2 1739 aa13.35□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 A930003A15RikQ3U552 87 aa13.35□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Lynx1P0DP60 116 aa13.35□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ccl25O35903 144 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Id3P41133 119 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Klk13Q8CGR6 276 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Trav14-3A0A075B607 120 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Gm12169F2Z474 250 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Cox6a1P43024 111 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Colca2F8VPY8 239 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 IappP12968 93 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Trav9-1A0A075B601 112 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Defa21Q8C1P2 93 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ndufa1O35683 70 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ighv1-62-2A0A0A6YXZ4 119 aa13.34□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Ighv1-55A0A075B5W6 117 aa13.33□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Mtatp8P03930 67 aa13.33□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Fam241bQ9D882 120 aa13.33□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 E130218I03RikA0A0U1RNU5 63 aa13.33□□□□□ -0.27
Ccdc88a-201ENSMUST00000040182 Trbv31A0A075B5J5 111 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Gm20499D3Z4G5 72 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Cox17P56394 63 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Wisp1O54775 367 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Klhdc3Q8VEM9 382 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Gata4Q08369 441 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 9430097D07RikQ8BS47 195 aa13.33□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Myo9aQ8C170 2542 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Igkv8-16A0A0G2JDG9 121 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Tmem14cQ9CQN6 114 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 MplkipQ9D011 178 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Trav4-3A0A0B4J1K1 110 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Dad1P61804 113 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Tomm6Q9CQN3 74 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Dpm3Q9D1Q4 92 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 P01649 108 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 1700084M14RikB1AT01 78 aa13.32□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Zcchc24B2RVL6 241 aaKnown RBP13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Zfp462B1AWL2 2495 aaKnown RBP13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 A0A1Y7VLU2 103 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Gm43517E9PYS1 339 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 P03980 138 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Ccl6P27784 116 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Gm10881P01642 115 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Lypd8Q9D7S0 255 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Zfp11P10751 647 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 4930447F04RikA2AFR2 126 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Thsd7bQ6P4U0 1607 aa13.31□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Trav14d-1A0A075B6B1 121 aa13.3□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Gm28778A0A087WSK7 233 aa13.3□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Zfp36l1P23950 338 aa13.3□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Gm9936Q8C864 160 aa13.3□□□□□ -0.28
Ccdc88a-201ENSMUST00000040182 Lrrk2Q5S006 2527 aa13.3□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms