RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Hbb-bsA8DUK4 147 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Hbb-b1P02088 147 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Cox7cP17665 63 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Aqp6Q8C4A0 293 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Zzef1Q5SSH7 2924 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Ighv1-53A0A075B5W3 117 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 P06334 169 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Tal2Q62282 108 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Hif1anQ8BLR9 349 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Klk15Q8CGR4 254 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 NpbQ8K4P1 119 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Mrpl16Q99N93 251 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Q9CX25 107 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 RhohQ9D3G9 191 aa14.71□□□□□ -0.05
Ccdc50-201ENSMUST00000039443 Zfhx3Q61329 3726 aa14.71□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 ColqO35348 457 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 SbpP15501 199 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 NrgnP60761 78 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 F930015N05RikQ8C3A3 210 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Bub3Q9WVA3 326 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Wisp2Q9Z0G4 251 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Esp4A8R0T8 117 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Fgf6P21658 208 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Tcl1b4P56844 120 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Gpx7Q99LJ6 186 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Tm4sf20Q9CQY8 226 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Ufc1Q9CR09 167 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Map1aQ9QYR6 2776 aa14.7□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Igkv4-57A0A0A6YYE7 117 aa14.69□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Zfand3Q497H0 227 aa14.69□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Try10Q792Z1 246 aaKnown RBP14.69□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Trank1Q8BV79 2999 aa14.69□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 P06330 118 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Cd24P24807 76 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Bsph2Q0Q236 131 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Hes7Q8BKT2 225 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Spock3Q8BKV0 436 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Gm5105Q8C6Y9 112 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Gm4763Q8CFJ5 196 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 MturnQ8CGA4 131 aa14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 ManfQ9CXI5 179 aaKnown RBP14.68□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Trav7-5A0A0G2JFX6 112 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Cdx4Q07424 282 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Parm1Q923D3 296 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Stpg1Q9D2F5 341 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Dopey1Q8BL99 2399 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Igkv4-59A0A0B4J1I8 117 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 H2al2bA9Z055 111 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 P01801 115 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 A130051J06RikQ8CAU1 227 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Q9D727 114 aa14.67□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Defa34D3Z0J0 93 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Smr3aQ61900 147 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Spink6Q8BT20 105 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Dusp14Q9JLY7 198 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Psmb11Q8BG41 302 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Wipf1Q8K1I7 493 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Snai3Q9QY31 287 aa14.66□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 TgfaP48030 159 aa14.65□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Odf3l1Q810P2 275 aa14.65□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Mcrip2Q9CQB2 160 aaKnown RBP14.65□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Cxcl14Q9WUQ5 99 aa14.65□□□□□ -0.06
Ccdc50-201ENSMUST00000039443 Rbfox3Q8BIF2 374 aa14.64□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ighv3-4A0A0A6YXF1 117 aa14.64□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ndufa1O35683 70 aa14.64□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ins1P01325 108 aa14.64□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Tnfrsf9P20334 256 aa14.63□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 FshbQ60687 130 aa14.63□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ovol2Q8CIV7 274 aa14.63□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Atp6v0e1Q9CQD8 81 aa14.63□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 1700056E22RikF7CNM6 234 aa14.63□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Trav21-dv12A0A075B6C4 109 aa14.62□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ccl6P27784 116 aa14.62□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Prok1Q14A28 105 aa14.62□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Spink2Q8BMY7 86 aa14.62□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Odf3Q920N1 254 aa14.62□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Igkv4-81A0A0G2JEY5 119 aa14.61□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Tmem238A9JSM3 176 aa14.61□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Atxn7l1Q9CZ05 146 aa14.61□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Umad1E0CX23 159 aa14.61□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Rpl24Q8BP67 157 aaKnown RBP14.61□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Nit2Q9JHW2 276 aa14.61□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Gata3P23772 443 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Gm12888Q3UW77 119 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Slc16a4Q8R0M8 500 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Defb30Q30KN4 75 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Tctex1d4Q8CDY7 219 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ormdl2Q9CQZ0 153 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Pgpep1lQ9CWB5 130 aa14.6□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ly6lH3BJG9 140 aa14.59□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Vamp8O70404 101 aa14.59□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 E130116L18RikQ8BMV6 101 aa14.59□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Atp6v0bQ91V37 205 aa14.59□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Ptpn13Q64512 2453 aa14.59□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Gm29289A0A087WPY7 166 aa14.58□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Gm4064A0A087WR82 380 aa14.58□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Igkv4-71A0A0G2JEH0 117 aa14.58□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Gm10352B2RWR6 380 aa14.58□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Gm21693J3QK27 380 aa14.58□□□□□ -0.07
Ccdc50-201ENSMUST00000039443 Rbmy1a1O35698 380 aa14.58□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms