RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 ManfQ9CXI5 179 aaKnown RBP11.51□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ncor1Q60974 2453 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm9242J3QNY1 357 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ins1P01325 108 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Spock3Q8BKV0 436 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Aqp6Q8C4A0 293 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Snai3Q9QY31 287 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm26938S4R185 226 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Defb30Q30KN4 75 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Cox11Q6P8I6 275 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ubald2Q8BQH4 164 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gpx7Q99LJ6 186 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 Obox1Q9D350 204 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 CrebbpP45481 2441 aa11.5□□□□□ -0.57
Nup54-201ENSMUST00000038514 H2al2bA9Z055 111 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gosr1O88630 250 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gata3P23772 443 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Psmb11Q8BG41 302 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Odf3Q920N1 254 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ufc1Q9CR09 167 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Wfdc15bQ9JHY4 80 aa11.49□□□□□ -0.57
Nup54-201ENSMUST00000038514 Igkv4-71A0A0G2JEH0 117 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm12888Q3UW77 119 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 RhohQ9D3G9 191 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 Trank1Q8BV79 2999 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ndufa1O35683 70 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 P01794 123 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm94Q3V2D2 93 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 TctaQ8VEA7 122 aa11.48□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ighv3-4A0A0A6YXF1 117 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Hbb-bsA8DUK4 147 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Esp3J3QN49 87 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Hbb-b1P02088 147 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Cox7cP17665 63 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Nbl1Q61477 178 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Fbn2Q61555 2907 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ly6lH3BJG9 140 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 P06334 169 aa11.47□□□□□ -0.57
Nup54-201ENSMUST00000038514 Tln1P26039 2541 aaKnown RBP11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm29289A0A087WPY7 166 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm4064A0A087WR82 380 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm10352B2RWR6 380 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm17727E9Q4V7 109 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Gm21693J3QK27 380 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Rbmy1a1O35698 380 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Socs3O35718 225 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Spint3Q3UW09 88 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 Ang2Q64438 145 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 ApomQ9Z1R3 190 aa11.46□□□□□ -0.57
Nup54-201ENSMUST00000038514 DspE9Q557 2883 aaKnown RBP11.46□□□□□ -0.58
Nup54-201ENSMUST00000038514 Chac1Q8R3J5 223 aa11.46□□□□□ -0.58
Nup54-201ENSMUST00000038514 Pgpep1lQ9CWB5 130 aa11.46□□□□□ -0.58
Nup54-201ENSMUST00000038514 LbhQ9CX60 105 aa11.46□□□□□ -0.58
Nup54-201ENSMUST00000038514 Q9D727 114 aa11.46□□□□□ -0.58
Nup54-201ENSMUST00000038514 Prrc2aQ7TSC1 2158 aaKnown RBP11.46□□□□□ -0.58
Nup54-201ENSMUST00000038514 Defa34D3Z0J0 93 aa11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Gm9970F6ZED4 185 aa11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Egr1P08046 533 aa11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Srsf1Q6PDM2 248 aaKnown RBP11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Hif1anQ8BLR9 349 aa11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Smg1Q8BKX6 3658 aaKnown RBP11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Defb20Q30KP3 96 aa11.45□□□□□ -0.58
Nup54-201ENSMUST00000038514 Ighv1-74A0A0G2JGK2 117 aa11.44□□□□□ -0.58
Nup54-201ENSMUST00000038514 Gm10036E9PYL9 178 aaKnown RBP11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 TcraP01849 138 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Fxyd7P59648 80 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Khdc1cQ4KL78 166 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Tal2Q62282 108 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Cep250Q60952 2414 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 TshbP12656 138 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Ube2e1P52482 193 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Tmem11Q8BK08 190 aa11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Dnajb12Q9QYI4 376 aaKnown RBP11.43□□□□□ -0.58
Nup54-201ENSMUST00000038514 Gm12057A0A087WR21 115 aa11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Smim1P0C8K7 78 aa11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Fhl1P97447 280 aaKnown RBP11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Try10Q792Z1 246 aaKnown RBP11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Cdx4Q07424 282 aa11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Slc16a4Q8R0M8 500 aa11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Cxcl14Q9WUQ5 99 aa11.42□□□□□ -0.58
Nup54-201ENSMUST00000038514 Odf1Q61999 247 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Nit2Q9JHW2 276 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Zfp292Q9Z2U2 2698 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Tmem238A9JSM3 176 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Zfp248Q640N4 576 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Gm14137Q8CE97 175 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Gm26920S4R2A5 56 aa11.41□□□□□ -0.58
Nup54-201ENSMUST00000038514 Ighv1-22A0A075B5U7 117 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Igkv4-70A0A0B4J1I5 116 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Gm6040Q4QY32 63 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Msrb2Q78J03 175 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Tmem14cQ9CQN6 114 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 8030423J24RikQ9CX45 142 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Atxn7l1Q9CZ05 146 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Hcfc1Q61191 2045 aaKnown RBP11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Iglc1A0A0G2JE99 106 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Umad1E0CX23 159 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Ighv1-62-3P01754 117 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 P01843 105 aa11.4□□□□□ -0.58
Nup54-201ENSMUST00000038514 Rpl24Q8BP67 157 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms