RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Gm20517G3UVU6 152 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 Nbl1Q61477 178 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 MycbQ6P8Z1 170 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 Gtsf1lQ9CWD0 151 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 Tmem8bB1AWJ5 472 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 S100a8P27005 89 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 Il22ra1Q80XZ4 581 aa12.6□□□□□ -0.39
Trim8-201ENSMUST00000026008 Tcrg-V6A0A075B5Y8 134 aa12.59□□□□□ -0.39
Trim8-201ENSMUST00000026008 Mcrip2Q9CQB2 160 aaKnown RBP12.59□□□□□ -0.39
Trim8-201ENSMUST00000026008 Pgpep1lQ9CWB5 130 aa12.59□□□□□ -0.39
Trim8-201ENSMUST00000026008 PerpQ9JK95 193 aa12.59□□□□□ -0.39
Trim8-201ENSMUST00000026008 Olfr1209Q3SXJ3 310 aa12.59□□□□□ -0.39
Trim8-201ENSMUST00000026008 Hoxc12Q8K5B8 280 aa12.59□□□□□ -0.39
Trim8-201ENSMUST00000026008 Igkv4-90A0A075B5L3 117 aa12.58□□□□□ -0.39
Trim8-201ENSMUST00000026008 Trav19A0A0B4J1K4 119 aa12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm5294J3QP53 216 aa12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 Atp5iQ06185 71 aaKnown RBP12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 Defa34D3Z0J0 93 aa12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 P01794 123 aa12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 Defa26Q3L180 93 aa12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 Q9CX25 107 aa12.58□□□□□ -0.4
Trim8-201ENSMUST00000026008 P01725 110 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ndufa4l2Q4FZG9 87 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Khdc1cQ4KL78 166 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ube2tQ9CQ37 204 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Trav16d-dv11A0A075B617 117 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 1520401A03RikA0A0J9YVH6 598 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gpx1P11352 201 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ndufc2Q9CQ54 120 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Erg28Q9ERY9 140 aa12.57□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm28038F7BCN9 126 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm7489Q3UT34 171 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Olfr322Q5NCC8 327 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Olfr317Q5NCD6 327 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 CtrlQ9ER05 264 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Pla2g2dQ9WVF6 144 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Csmd2V9GX34 3611 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Vsig4F6TUL9 280 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 TcraP01849 138 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gng4P50153 75 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 7420426K07RikQ3UX66 186 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 P01724 129 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 P01727 129 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 OtorQ9JIE3 128 aa12.56□□□□□ -0.4
Trim8-201ENSMUST00000026008 Abca12E9Q876 2595 aa12.55□□□□□ -0.4
Trim8-201ENSMUST00000026008 Rpl11Q9CXW4 178 aaKnown RBP12.55□□□□□ -0.4
Trim8-201ENSMUST00000026008 Dido1Q8C9B9 2256 aaKnown RBP12.55□□□□□ -0.4
Trim8-201ENSMUST00000026008 P01801 115 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Spock3Q8BKV0 436 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Hif1anQ8BLR9 349 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Cnn3Q9DAW9 330 aaKnown RBP12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Obox8V9GWY9 217 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ighv1-62-3P01754 117 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Mtatp8P03930 67 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Tcl1b4P56844 120 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Odf3l1Q810P2 275 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Cby1Q9D1C2 127 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm29289A0A087WPY7 166 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm4064A0A087WR82 380 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm10352B2RWR6 380 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm21693J3QK27 380 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Rbmy1a1O35698 380 aa12.54□□□□□ -0.4
Trim8-201ENSMUST00000026008 Gm5819E9PZ96 154 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 1700067P10RikG3X8U2 183 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 8030423J24RikQ9CX45 142 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ighv3-1A0A075B5S6 116 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Igkv4-59A0A0B4J1I8 117 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 1700056E22RikF7CNM6 234 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 P06330 118 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Edn3P48299 214 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ube2e1P52482 193 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 NrgnP60761 78 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 PlnP61014 52 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Pxt1Q8K459 51 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ubr5Q80TP3 2792 aa12.53□□□□□ -0.4
Trim8-201ENSMUST00000026008 Itgb1bp1O35671 200 aa12.52□□□□□ -0.4
Trim8-201ENSMUST00000026008 AW146154Q3TPQ7 468 aa12.52□□□□□ -0.4
Trim8-201ENSMUST00000026008 Hspe1Q64433 102 aaKnown RBP12.52□□□□□ -0.4
Trim8-201ENSMUST00000026008 Spcs1Q9D958 161 aa12.52□□□□□ -0.4
Trim8-201ENSMUST00000026008 Ighv1-74A0A0G2JGK2 117 aa12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Gm12845A0A0N4SUM5 588 aa12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Tmem97Q8VD00 176 aa12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ighv1-23A0A0A6YVW3 117 aa12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Fhl1P97447 280 aaKnown RBP12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Msrb2Q78J03 175 aa12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Gpx7Q99LJ6 186 aa12.52□□□□□ -0.41
Trim8-201ENSMUST00000026008 Gkn1Q9CR36 201 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Gm26920S4R2A5 56 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Muc4Q8JZM8 3443 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Abca2P41234 2434 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Fgf6P21658 208 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 TgfaP48030 159 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Ang5Q5GAN1 145 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Htr1dQ61224 374 aa12.51□□□□□ -0.41
Trim8-201ENSMUST00000026008 Gm9242J3QNY1 357 aa12.5□□□□□ -0.41
Trim8-201ENSMUST00000026008 A130051J06RikQ8CAU1 227 aa12.5□□□□□ -0.41
Trim8-201ENSMUST00000026008 Sorl1O88307 2215 aaKnown RBP12.5□□□□□ -0.41
Trim8-201ENSMUST00000026008 Olfr498Q8VEW2 330 aa12.5□□□□□ -0.41
Trim8-201ENSMUST00000026008 S100a4P07091 101 aa12.5□□□□□ -0.41
Trim8-201ENSMUST00000026008 Q4KKZ1 196 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms