RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Pla2g2cP48076 150 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Lmo4P61969 165 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gm94Q3V2D2 93 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 RhohQ9D3G9 191 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gnb1lQ9EQ15 326 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Dopey2Q3UHQ6 2295 aa14.35□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gng4P50153 75 aa14.35□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ubtd1Q91WB7 227 aa14.35□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Shisa9Q9CZN4 424 aa14.35□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gm26938S4R185 226 aa14.35□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Smim13E9Q942 88 aa14.34□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ins1P01325 108 aa14.34□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gm26727M0QWT1 121 aa14.34□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Edn3P48299 214 aa14.34□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Defa26Q3L180 93 aa14.34□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Hif1anQ8BLR9 349 aa14.34□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 P01801 115 aa14.33□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 SstP60041 116 aa14.33□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tcf15Q60756 195 aa14.33□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gpx7Q99LJ6 186 aa14.33□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ube2tQ9CQ37 204 aa14.33□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Cmya5Q70KF4 3739 aa14.33□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Igkv4-71A0A0G2JEH0 117 aa14.33□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Sertad4A7DTG3 377 aa14.33□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 P06330 118 aa14.33□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Prrc2aQ7TSC1 2158 aaKnown RBP14.33□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 TgfaP48030 159 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Defa9P50707 93 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Tcl1b4P56844 120 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Gm17334Q8C6U3 126 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Mettl26Q9DCS2 204 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Gm5464Q3UY29 175 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Snx22Q8C084 192 aa14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Cnn3Q9DAW9 330 aaKnown RBP14.32□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Tmem8bB1AWJ5 472 aa14.31□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 TctaQ8VEA7 122 aa14.31□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Gm12888Q3UW77 119 aa14.31□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Spock3Q8BKV0 436 aa14.31□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Dusp14Q9JLY7 198 aa14.31□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Olfr322Q5NCC8 327 aa14.3□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Olfr317Q5NCD6 327 aa14.3□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Fhl1P97447 280 aaKnown RBP14.3□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Zfp248Q640N4 576 aa14.3□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Snai3Q9QY31 287 aa14.3□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Ash1lQ99MY8 2958 aa14.29□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Gpx1P11352 201 aa14.29□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Odf1Q61999 247 aa14.29□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Cspg4Q8VHY0 2327 aa14.28□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Thy1P01831 162 aa14.28□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Sh3bgrl2Q8BG73 107 aa14.28□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Prr9Q8BV84 116 aa14.28□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Atp6v0bQ91V37 205 aa14.28□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Gm15557A6PWY0 234 aa14.27□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Fgf6P21658 208 aa14.27□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Mob4Q6PEB6 225 aa14.27□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Nit2Q9JHW2 276 aa14.27□□□□□ -0.12
Shkbp1-201ENSMUST00000003857 Igkv4-70A0A0B4J1I5 116 aa14.27□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Esp3J3QN49 87 aa14.27□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Casp6O08738 276 aa14.27□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ighv1-62-3P01754 117 aa14.27□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ufc1Q9CR09 167 aa14.27□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Q9DAB9 146 aa14.27□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 P06334 169 aa14.26□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 TdhQ8K3F7 373 aa14.26□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Pxt1Q8K459 51 aa14.26□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Gm7489Q3UT34 171 aa14.26□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Dpm3Q9D1Q4 92 aa14.26□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Igsf23B2RTN2 239 aa14.25□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 MturnQ8CGA4 131 aa14.25□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 H2al2bA9Z055 111 aa14.25□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Arl3Q9WUL7 182 aa14.25□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ubr5Q80TP3 2792 aa14.25□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Med13lQ6JPI3 2207 aa14.25□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Sptbn1Q62261 2363 aaKnown RBP14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ighv1-82A0A0G2JEU7 117 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 P01794 123 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 TshbP12656 138 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Cdx4Q07424 282 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 SNORCQ9CXL7 121 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ighv1-80A0A075B5Y3 117 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Igkv20-101-2A0A0G2JDU3 113 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Adrb3P25962 400 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Erg28Q9ERY9 140 aa14.24□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Igkv4-57-1A0A075B5M4 119 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ighv1-9A0A0A6YW37 117 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Mtatp8P03930 67 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Khdc1cQ4KL78 166 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Ang5Q5GAN1 145 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Spg11Q3UHA3 2430 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 P01820 115 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Chac1Q8R3J5 223 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Tmem14cQ9CQN6 114 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Obox1Q9D350 204 aa14.23□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Q4KKZ1 196 aa14.22□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Srsf1Q6PDM2 248 aaKnown RBP14.22□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 4930447F04RikA2AFR2 126 aa14.22□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Hist1h1tQ07133 208 aa14.22□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Rasl11bQ922H7 247 aa14.22□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Tm4sf20Q9CQY8 226 aa14.22□□□□□ -0.13
Shkbp1-201ENSMUST00000003857 Arhgap32Q811P8 2089 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms