RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
CASC19-240ENST00000641578 TRAV22A0A0B4J277 110 aa4.36□□□□□ -1.71
CASC19-240ENST00000641578 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
CASC19-240ENST00000641578 TMEM258P61165 79 aa4.36□□□□□ -1.71
CASC19-240ENST00000641578 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
CASC19-240ENST00000641578 CYSTM1Q9H1C7 97 aa4.36□□□□□ -1.71
CASC19-240ENST00000641578 H0Y9P7 68 aa4.35□□□□□ -1.71
CASC19-240ENST00000641578 NDUFS5O43920 106 aa4.35□□□□□ -1.71
CASC19-240ENST00000641578 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
CASC19-240ENST00000641578 SNURFQ9Y675 71 aa4.35□□□□□ -1.71
CASC19-240ENST00000641578 H7BZZ5 65 aa4.34□□□□□ -1.71
CASC19-240ENST00000641578 FP248Q71RG6 208 aaPredicted RBP4.33□□□□□ -1.72
CASC19-240ENST00000641578 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
CASC19-240ENST00000641578 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
CASC19-240ENST00000641578 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
CASC19-240ENST00000641578 C1orf64Q8NEQ6 169 aa4.31□□□□□ -1.72
CASC19-240ENST00000641578 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
CASC19-240ENST00000641578 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
CASC19-240ENST00000641578 IGLV7-46A0A075B6I9 117 aa4.29□□□□□ -1.72
CASC19-240ENST00000641578 FAM236DA0A1B0GTK5 79 aa4.29□□□□□ -1.72
CASC19-240ENST00000641578 FAM236CP0DP71 79 aa4.29□□□□□ -1.72
CASC19-240ENST00000641578 RETNLBQ9BQ08 111 aa4.29□□□□□ -1.72
CASC19-240ENST00000641578 TNXBP22105 4242 aa4.28□□□□□ -1.72
CASC19-240ENST00000641578 A8MUU9 505 aa4.28□□□□□ -1.72
CASC19-240ENST00000641578 Q5W150 140 aa4.28□□□□□ -1.72
CASC19-240ENST00000641578 C20orf166-AS1Q96NR2 134 aa4.28□□□□□ -1.72
CASC19-240ENST00000641578 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
CASC19-240ENST00000641578 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
CASC19-240ENST00000641578 PRR4Q16378 134 aa4.26□□□□□ -1.73
CASC19-240ENST00000641578 LRP1Q07954 4544 aaKnown RBP4.25□□□□□ -1.73
CASC19-240ENST00000641578 C9orf92A6NGG3 77 aa4.25□□□□□ -1.73
CASC19-240ENST00000641578 RPS28P62857 69 aaKnown RBP4.25□□□□□ -1.73
CASC19-240ENST00000641578 LRP2P98164 4655 aa4.24□□□□□ -1.73
CASC19-240ENST00000641578 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
CASC19-240ENST00000641578 CYP4F30PQ9H0H9 118 aa4.24□□□□□ -1.73
CASC19-240ENST00000641578 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
CASC19-240ENST00000641578 SERP1Q9Y6X1 66 aa4.22□□□□□ -1.73
CASC19-240ENST00000641578 PCOTHQ58A44 107 aa4.2□□□□□ -1.74
CASC19-240ENST00000641578 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
CASC19-240ENST00000641578 TPRXLQ17RH7 258 aa4.18□□□□□ -1.74
CASC19-240ENST00000641578 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
CASC19-240ENST00000641578 HRES1P13985 223 aa4.16□□□□□ -1.74
CASC19-240ENST00000641578 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
CASC19-240ENST00000641578 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
CASC19-240ENST00000641578 DMAC1Q96GE9 116 aa4.13□□□□□ -1.75
CASC19-240ENST00000641578 SMIM26A0A096LP01 95 aa4.12□□□□□ -1.75
CASC19-240ENST00000641578 SPINK7P58062 85 aa4.12□□□□□ -1.75
CASC19-240ENST00000641578 ACYP2P14621 99 aa4.11□□□□□ -1.75
CASC19-240ENST00000641578 A8MUN3 132 aa4.1□□□□□ -1.75
CASC19-240ENST00000641578 LCE3AQ5TA76 89 aa4.1□□□□□ -1.75
CASC19-240ENST00000641578 COA5Q86WW8 74 aa4.1□□□□□ -1.75
CASC19-240ENST00000641578 FAT4Q6V0I7 4981 aa4.06□□□□□ -1.76
CASC19-240ENST00000641578 C4orf26Q17RF5 130 aa4.05□□□□□ -1.76
CASC19-240ENST00000641578 MUC2Q02817 5179 aa4.04□□□□□ -1.76
CASC19-240ENST00000641578 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
CASC19-240ENST00000641578 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
CASC19-240ENST00000641578 Q1T7F1 81 aa4.03□□□□□ -1.76
CASC19-240ENST00000641578 V9GYY9 64 aa4.03□□□□□ -1.76
CASC19-240ENST00000641578 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
CASC19-240ENST00000641578 SPTSSBQ8NFR3 76 aa3.98□□□□□ -1.77
CASC19-240ENST00000641578 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
CASC19-240ENST00000641578 RBM12B-AS1Q9P1G2 102 aa3.96□□□□□ -1.78
CASC19-240ENST00000641578 LPAP08519 4548 aa3.94□□□□□ -1.78
CASC19-240ENST00000641578 H1FX-AS1Q4G0G2 97 aa3.93□□□□□ -1.78
CASC19-240ENST00000641578 MUC17Q685J3 4493 aa3.92□□□□□ -1.78
CASC19-240ENST00000641578 M0R2T5 61 aa3.91□□□□□ -1.78
CASC19-240ENST00000641578 PRR15LQ9BU68 103 aa3.91□□□□□ -1.78
CASC19-240ENST00000641578 PSPHP1O15172 72 aa3.9□□□□□ -1.79
CASC19-240ENST00000641578 S4R3F8 94 aa3.9□□□□□ -1.79
CASC19-240ENST00000641578 SEC61GP60059 68 aa3.89□□□□□ -1.79
CASC19-240ENST00000641578 Q5VV11 94 aa3.89□□□□□ -1.79
CASC19-240ENST00000641578 KRTAP4-1Q9BYQ7 146 aa3.89□□□□□ -1.79
CASC19-240ENST00000641578 A0A1B0GU69 56 aa3.88□□□□□ -1.79
CASC19-240ENST00000641578 LCA10Q71F78 164 aa3.87□□□□□ -1.79
CASC19-240ENST00000641578 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
CASC19-240ENST00000641578 MT1HP80294 61 aa3.82□□□□□ -1.8
CASC19-240ENST00000641578 CSAG1Q6PB30 78 aa3.82□□□□□ -1.8
CASC19-240ENST00000641578 A6NED7 52 aa3.81□□□□□ -1.8
CASC19-240ENST00000641578 KRTAP5-5Q701N2 237 aaPredicted RBP3.81□□□□□ -1.8
CASC19-240ENST00000641578 H0YAA0 97 aa3.78□□□□□ -1.8
CASC19-240ENST00000641578 UQCR11O14957 56 aa3.78□□□□□ -1.8
CASC19-240ENST00000641578 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
CASC19-240ENST00000641578 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
CASC19-240ENST00000641578 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
CASC19-240ENST00000641578 PRO0628Q9UI54 55 aa3.76□□□□□ -1.81
CASC19-240ENST00000641578 A0A1B0GU33 70 aa3.75□□□□□ -1.81
CASC19-240ENST00000641578 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
CASC19-240ENST00000641578 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
CASC19-240ENST00000641578 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
CASC19-240ENST00000641578 ADM2Q7Z4H4 148 aa3.72□□□□□ -1.81
CASC19-240ENST00000641578 P0C880 135 aa3.69□□□□□ -1.82
CASC19-240ENST00000641578 A8MU10 97 aa3.68□□□□□ -1.82
CASC19-240ENST00000641578 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
CASC19-240ENST00000641578 M0QZ58 72 aa3.66□□□□□ -1.82
CASC19-240ENST00000641578 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
CASC19-240ENST00000641578 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
CASC19-240ENST00000641578 KRTAP13-4Q3LI77 160 aa3.63□□□□□ -1.83
CASC19-240ENST00000641578 KRTAP12-2P59991 146 aa3.62□□□□□ -1.83
CASC19-240ENST00000641578 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
CASC19-240ENST00000641578 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms