RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 HMCN2Q8NDA2 5059 aa4.96□□□□□ -1.62
PHGDH-215ENST00000641371 LPAP08519 4548 aa4.95□□□□□ -1.62
PHGDH-215ENST00000641371 SEC61GP60059 68 aa4.95□□□□□ -1.62
PHGDH-215ENST00000641371 S4R3F8 94 aa4.93□□□□□ -1.62
PHGDH-215ENST00000641371 A0A1B0GU69 56 aa4.92□□□□□ -1.62
PHGDH-215ENST00000641371 PSPHP1O15172 72 aa4.89□□□□□ -1.63
PHGDH-215ENST00000641371 Q5VV11 94 aa4.88□□□□□ -1.63
PHGDH-215ENST00000641371 LCA10Q71F78 164 aa4.85□□□□□ -1.63
PHGDH-215ENST00000641371 CSAG1Q6PB30 78 aa4.84□□□□□ -1.63
PHGDH-215ENST00000641371 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
PHGDH-215ENST00000641371 A6NED7 52 aa4.82□□□□□ -1.64
PHGDH-215ENST00000641371 UQCR11O14957 56 aa4.81□□□□□ -1.64
PHGDH-215ENST00000641371 KRTAP3-3Q9BYR6 98 aa4.81□□□□□ -1.64
PHGDH-215ENST00000641371 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
PHGDH-215ENST00000641371 H0YAA0 97 aa4.78□□□□□ -1.64
PHGDH-215ENST00000641371 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
PHGDH-215ENST00000641371 KRTAP9-2Q9BYQ4 174 aa4.77□□□□□ -1.65
PHGDH-215ENST00000641371 CDC42SE1Q9NRR8 79 aa4.77□□□□□ -1.65
PHGDH-215ENST00000641371 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
PHGDH-215ENST00000641371 A0A1B0GU33 70 aa4.74□□□□□ -1.65
PHGDH-215ENST00000641371 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
PHGDH-215ENST00000641371 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
PHGDH-215ENST00000641371 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
PHGDH-215ENST00000641371 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
PHGDH-215ENST00000641371 SPATA8Q6RVD6 105 aa4.72□□□□□ -1.65
PHGDH-215ENST00000641371 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
PHGDH-215ENST00000641371 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
PHGDH-215ENST00000641371 KRTAP3-2Q9BYR7 98 aa4.66□□□□□ -1.66
PHGDH-215ENST00000641371 M0QZ58 72 aa4.65□□□□□ -1.67
PHGDH-215ENST00000641371 K7ERS5 55 aa4.61□□□□□ -1.67
PHGDH-215ENST00000641371 P0C880 135 aa4.6□□□□□ -1.67
PHGDH-215ENST00000641371 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
PHGDH-215ENST00000641371 CRIPTQ9P021 101 aa4.59□□□□□ -1.67
PHGDH-215ENST00000641371 MUC2Q02817 5179 aa4.56□□□□□ -1.68
PHGDH-215ENST00000641371 FAT4Q6V0I7 4981 aa4.56□□□□□ -1.68
PHGDH-215ENST00000641371 M0R2T5 61 aa4.55□□□□□ -1.68
PHGDH-215ENST00000641371 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
PHGDH-215ENST00000641371 R4GN34 69 aa4.55□□□□□ -1.68
PHGDH-215ENST00000641371 A8MU10 97 aa4.53□□□□□ -1.68
PHGDH-215ENST00000641371 MT1HP80294 61 aa4.52□□□□□ -1.69
PHGDH-215ENST00000641371 KRTAP13-4Q3LI77 160 aa4.5□□□□□ -1.69
PHGDH-215ENST00000641371 A6NN06 94 aa4.48□□□□□ -1.69
PHGDH-215ENST00000641371 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
PHGDH-215ENST00000641371 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
PHGDH-215ENST00000641371 A0A0D9SG42 100 aa4.46□□□□□ -1.7
PHGDH-215ENST00000641371 CRCT1Q9UGL9 99 aa4.43□□□□□ -1.7
PHGDH-215ENST00000641371 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
PHGDH-215ENST00000641371 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
PHGDH-215ENST00000641371 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
PHGDH-215ENST00000641371 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
PHGDH-215ENST00000641371 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
PHGDH-215ENST00000641371 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
PHGDH-215ENST00000641371 KRTAP10-10P60014 251 aa4.36□□□□□ -1.71
PHGDH-215ENST00000641371 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
PHGDH-215ENST00000641371 MT2AP02795 61 aa4.35□□□□□ -1.71
PHGDH-215ENST00000641371 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
PHGDH-215ENST00000641371 ROMO1P60602 79 aa4.34□□□□□ -1.71
PHGDH-215ENST00000641371 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.71
PHGDH-215ENST00000641371 FSIP2Q5CZC0 6907 aa4.32□□□□□ -1.72
PHGDH-215ENST00000641371 MT1FP04733 61 aa4.31□□□□□ -1.72
PHGDH-215ENST00000641371 PLAC4Q8WY50 150 aa4.28□□□□□ -1.72
PHGDH-215ENST00000641371 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
PHGDH-215ENST00000641371 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
PHGDH-215ENST00000641371 KRTAP19-8Q3LI54 63 aa4.25□□□□□ -1.73
PHGDH-215ENST00000641371 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
PHGDH-215ENST00000641371 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
PHGDH-215ENST00000641371 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
PHGDH-215ENST00000641371 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
PHGDH-215ENST00000641371 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
PHGDH-215ENST00000641371 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
PHGDH-215ENST00000641371 MT1BP07438 61 aa4.11□□□□□ -1.75
PHGDH-215ENST00000641371 TNP1P09430 55 aa4.11□□□□□ -1.75
PHGDH-215ENST00000641371 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
PHGDH-215ENST00000641371 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
PHGDH-215ENST00000641371 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
PHGDH-215ENST00000641371 LCE2BO14633 110 aa4.03□□□□□ -1.76
PHGDH-215ENST00000641371 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
PHGDH-215ENST00000641371 MT1XP80297 61 aa3.99□□□□□ -1.77
PHGDH-215ENST00000641371 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
PHGDH-215ENST00000641371 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
PHGDH-215ENST00000641371 USH2AO75445 5202 aa3.88□□□□□ -1.79
PHGDH-215ENST00000641371 KRTAP10-12P60413 245 aa3.87□□□□□ -1.79
PHGDH-215ENST00000641371 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
PHGDH-215ENST00000641371 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
PHGDH-215ENST00000641371 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
PHGDH-215ENST00000641371 KRTAP10-7P60409 375 aaPredicted RBP3.8□□□□□ -1.8
PHGDH-215ENST00000641371 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PHGDH-215ENST00000641371 SYNE2Q8WXH0 6885 aaKnown RBP3.77□□□□□ -1.81
PHGDH-215ENST00000641371 KRTAP12-3P60328 96 aa3.71□□□□□ -1.82
PHGDH-215ENST00000641371 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
PHGDH-215ENST00000641371 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
PHGDH-215ENST00000641371 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
PHGDH-215ENST00000641371 KRTAP20-1Q3LI63 56 aa3.65□□□□□ -1.83
PHGDH-215ENST00000641371 NEBP20929 6669 aa3.61□□□□□ -1.83
PHGDH-215ENST00000641371 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
PHGDH-215ENST00000641371 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
PHGDH-215ENST00000641371 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
PHGDH-215ENST00000641371 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
PHGDH-215ENST00000641371 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
PHGDH-215ENST00000641371 LUZP6Q538Z0 58 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms