RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 P0C880 135 aa10.73□□□□□ -0.69
PMS1-222ENST00000639501 KIAA1109Q2LD37 5005 aa10.69□□□□□ -0.7
PMS1-222ENST00000639501 KRTAP13-4Q3LI77 160 aa10.68□□□□□ -0.7
PMS1-222ENST00000639501 KRTAP10-6P60371 365 aaPredicted RBP10.66□□□□□ -0.7
PMS1-222ENST00000639501 HSPG2P98160 4391 aa10.65□□□□□ -0.7
PMS1-222ENST00000639501 A0A0D9SG42 100 aa10.61□□□□□ -0.71
PMS1-222ENST00000639501 RYR1P21817 5038 aa10.61□□□□□ -0.71
PMS1-222ENST00000639501 KRTAP3-3Q9BYR6 98 aa10.6□□□□□ -0.71
PMS1-222ENST00000639501 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
PMS1-222ENST00000639501 TPRXLQ17RH7 258 aa10.59□□□□□ -0.71
PMS1-222ENST00000639501 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
PMS1-222ENST00000639501 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
PMS1-222ENST00000639501 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
PMS1-222ENST00000639501 KRTAP3-2Q9BYR7 98 aa10.54□□□□□ -0.72
PMS1-222ENST00000639501 C10orf95Q9H7T3 257 aa10.51□□□□□ -0.73
PMS1-222ENST00000639501 Q5VSD8 79 aa10.5□□□□□ -0.73
PMS1-222ENST00000639501 FAT3Q8TDW7 4589 aa10.49□□□□□ -0.73
PMS1-222ENST00000639501 SPINT4Q6UDR6 99 aa10.45□□□□□ -0.74
PMS1-222ENST00000639501 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
PMS1-222ENST00000639501 LRP1Q07954 4544 aaKnown RBP10.41□□□□□ -0.74
PMS1-222ENST00000639501 TNXBP22105 4242 aa10.37□□□□□ -0.75
PMS1-222ENST00000639501 MYCBP2O75592 4640 aa10.36□□□□□ -0.75
PMS1-222ENST00000639501 S4R3F8 94 aa10.35□□□□□ -0.75
PMS1-222ENST00000639501 KRTAP12-2P59991 146 aa10.35□□□□□ -0.75
PMS1-222ENST00000639501 KRTAP4-5Q9BYR2 181 aa10.3□□□□□ -0.76
PMS1-222ENST00000639501 BIRC6Q9NR09 4857 aa10.3□□□□□ -0.76
PMS1-222ENST00000639501 KRTAP15-1Q3LI76 137 aa10.28□□□□□ -0.76
PMS1-222ENST00000639501 NDUFAF8A1L188 74 aa10.23□□□□□ -0.77
PMS1-222ENST00000639501 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.77
PMS1-222ENST00000639501 KRTAP12-1P59990 96 aa10.2□□□□□ -0.78
PMS1-222ENST00000639501 XP32Q5T750 250 aa10.2□□□□□ -0.78
PMS1-222ENST00000639501 LPAP08519 4548 aa10.16□□□□□ -0.78
PMS1-222ENST00000639501 HERC2O95714 4834 aa10.14□□□□□ -0.79
PMS1-222ENST00000639501 MT1HL1P0DM35 61 aa10.06□□□□□ -0.8
PMS1-222ENST00000639501 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
PMS1-222ENST00000639501 LRP2P98164 4655 aa9.91□□□□□ -0.82
PMS1-222ENST00000639501 M0QZ58 72 aa9.89□□□□□ -0.83
PMS1-222ENST00000639501 J3QL48 77 aa9.84□□□□□ -0.83
PMS1-222ENST00000639501 HERC1Q15751 4861 aa9.75□□□□□ -0.85
PMS1-222ENST00000639501 R4GN34 69 aa9.63□□□□□ -0.87
PMS1-222ENST00000639501 LORP23490 312 aaPredicted RBP9.6□□□□□ -0.87
PMS1-222ENST00000639501 PLAC4Q8WY50 150 aa9.57□□□□□ -0.88
PMS1-222ENST00000639501 MUC17Q685J3 4493 aa9.44□□□□□ -0.9
PMS1-222ENST00000639501 HMCN2Q8NDA2 5059 aa9.43□□□□□ -0.9
PMS1-222ENST00000639501 MUC2Q02817 5179 aa9.29□□□□□ -0.92
PMS1-222ENST00000639501 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
PMS1-222ENST00000639501 SEC61BP60468 96 aaKnown RBP9.24□□□□□ -0.93
PMS1-222ENST00000639501 LUZP6Q538Z0 58 aa9.24□□□□□ -0.93
PMS1-222ENST00000639501 UBR4Q5T4S7 5183 aa9.21□□□□□ -0.93
PMS1-222ENST00000639501 CAMK2N1Q7Z7J9 78 aa9.2□□□□□ -0.94
PMS1-222ENST00000639501 PP632Q6XCG6 107 aa9.19□□□□□ -0.94
PMS1-222ENST00000639501 A0A0A0MQY5 61 aa9.14□□□□□ -0.95
PMS1-222ENST00000639501 RNF213Q63HN8 5207 aa9.13□□□□□ -0.95
PMS1-222ENST00000639501 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
PMS1-222ENST00000639501 FLGP20930 4061 aaPredicted RBP8.89□□□□□ -0.99
PMS1-222ENST00000639501 FAT4Q6V0I7 4981 aa8.89□□□□□ -0.99
PMS1-222ENST00000639501 TNP1P09430 55 aa8.87□□□□□ -0.99
PMS1-222ENST00000639501 SPRR5A0A1B0GTR4 108 aa8.86□□□□□ -0.99
PMS1-222ENST00000639501 KRTAP23-1A1A580 65 aa8.74□□□□□ -1.01
PMS1-222ENST00000639501 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
PMS1-222ENST00000639501 MT1HP80294 61 aa8.48□□□□□ -1.05
PMS1-222ENST00000639501 LCE3AQ5TA76 89 aa8.48□□□□□ -1.05
PMS1-222ENST00000639501 M0R2T5 61 aa8.45□□□□□ -1.06
PMS1-222ENST00000639501 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
PMS1-222ENST00000639501 SPRR2GQ9BYE4 73 aa8.43□□□□□ -1.06
PMS1-222ENST00000639501 PRO2289Q9P1D8 64 aa8.2□□□□□ -1.1
PMS1-222ENST00000639501 LCE2AQ5TA79 106 aaPredicted RBP8.18□□□□□ -1.1
PMS1-222ENST00000639501 KRTAP8-1Q8IUC2 63 aa8.17□□□□□ -1.1
PMS1-222ENST00000639501 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.1
PMS1-222ENST00000639501 MT1FP04733 61 aa8.13□□□□□ -1.11
PMS1-222ENST00000639501 MT2AP02795 61 aa8.12□□□□□ -1.11
PMS1-222ENST00000639501 KRTAP10-10P60014 251 aa8.08□□□□□ -1.12
PMS1-222ENST00000639501 INE1O15225 51 aa8.02□□□□□ -1.12
PMS1-222ENST00000639501 KRTAP10-5P60370 271 aa8.02□□□□□ -1.13
PMS1-222ENST00000639501 MT1XP80297 61 aa8□□□□□ -1.13
PMS1-222ENST00000639501 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
PMS1-222ENST00000639501 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.13
PMS1-222ENST00000639501 MT1BP07438 61 aa7.95□□□□□ -1.14
PMS1-222ENST00000639501 KRTAP10-12P60413 245 aa7.93□□□□□ -1.14
PMS1-222ENST00000639501 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
PMS1-222ENST00000639501 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
PMS1-222ENST00000639501 USH2AO75445 5202 aa7.8□□□□□ -1.16
PMS1-222ENST00000639501 FSIP2Q5CZC0 6907 aa7.73□□□□□ -1.17
PMS1-222ENST00000639501 LCE2BO14633 110 aa7.68□□□□□ -1.18
PMS1-222ENST00000639501 KMT2DO14686 5537 aa7.58□□□□□ -1.2
PMS1-222ENST00000639501 KRTAP19-5Q3LI72 72 aa7.57□□□□□ -1.2
PMS1-222ENST00000639501 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
PMS1-222ENST00000639501 KRTAP9-6A8MVA2 160 aa7.45□□□□□ -1.22
PMS1-222ENST00000639501 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
PMS1-222ENST00000639501 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
PMS1-222ENST00000639501 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
PMS1-222ENST00000639501 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
PMS1-222ENST00000639501 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
PMS1-222ENST00000639501 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
PMS1-222ENST00000639501 KRTAP2-3P0C7H8 128 aa7.22□□□□□ -1.25
PMS1-222ENST00000639501 KRTAP2-4Q9BYR9 128 aa7.22□□□□□ -1.25
PMS1-222ENST00000639501 KRTAP2-1Q9BYU5 128 aa7.22□□□□□ -1.25
PMS1-222ENST00000639501 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
PMS1-222ENST00000639501 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
PMS1-222ENST00000639501 FCGBPQ9Y6R7 5405 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms