RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 A6NED7 52 aa7.95□□□□□ -1.14
SPIN3-219ENST00000639053 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
SPIN3-219ENST00000639053 CDC42SE1Q9NRR8 79 aa7.94□□□□□ -1.14
SPIN3-219ENST00000639053 LCA10Q71F78 164 aa7.91□□□□□ -1.14
SPIN3-219ENST00000639053 MUC17Q685J3 4493 aa7.9□□□□□ -1.15
SPIN3-219ENST00000639053 SPTSSBQ8NFR3 76 aa7.89□□□□□ -1.15
SPIN3-219ENST00000639053 A8MU10 97 aa7.87□□□□□ -1.15
SPIN3-219ENST00000639053 A0A1B0GU69 56 aa7.86□□□□□ -1.15
SPIN3-219ENST00000639053 COX6B2Q6YFQ2 88 aa7.86□□□□□ -1.15
SPIN3-219ENST00000639053 SEC61GP60059 68 aa7.85□□□□□ -1.15
SPIN3-219ENST00000639053 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
SPIN3-219ENST00000639053 KRTAP4-1Q9BYQ7 146 aa7.84□□□□□ -1.15
SPIN3-219ENST00000639053 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
SPIN3-219ENST00000639053 A6NN06 94 aa7.81□□□□□ -1.16
SPIN3-219ENST00000639053 UQCR11O14957 56 aa7.69□□□□□ -1.18
SPIN3-219ENST00000639053 UBR4Q5T4S7 5183 aa7.68□□□□□ -1.18
SPIN3-219ENST00000639053 SPATA8Q6RVD6 105 aa7.67□□□□□ -1.18
SPIN3-219ENST00000639053 RBM12B-AS1Q9P1G2 102 aa7.65□□□□□ -1.18
SPIN3-219ENST00000639053 RNF213Q63HN8 5207 aa7.65□□□□□ -1.19
SPIN3-219ENST00000639053 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
SPIN3-219ENST00000639053 MUC2Q02817 5179 aa7.6□□□□□ -1.19
SPIN3-219ENST00000639053 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.2
SPIN3-219ENST00000639053 S4R3F8 94 aa7.57□□□□□ -1.2
SPIN3-219ENST00000639053 H1FX-AS1Q4G0G2 97 aa7.56□□□□□ -1.2
SPIN3-219ENST00000639053 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
SPIN3-219ENST00000639053 A0A1B0GU33 70 aa7.52□□□□□ -1.21
SPIN3-219ENST00000639053 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
SPIN3-219ENST00000639053 H0YAA0 97 aa7.44□□□□□ -1.22
SPIN3-219ENST00000639053 KRTAP10-6P60371 365 aaPredicted RBP7.41□□□□□ -1.22
SPIN3-219ENST00000639053 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
SPIN3-219ENST00000639053 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
SPIN3-219ENST00000639053 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
SPIN3-219ENST00000639053 MT1HP80294 61 aa7.32□□□□□ -1.24
SPIN3-219ENST00000639053 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
SPIN3-219ENST00000639053 PRAC1Q96KF2 57 aa7.31□□□□□ -1.24
SPIN3-219ENST00000639053 ADM2Q7Z4H4 148 aa7.28□□□□□ -1.24
SPIN3-219ENST00000639053 P0C880 135 aa7.25□□□□□ -1.25
SPIN3-219ENST00000639053 K7ERS5 55 aa7.25□□□□□ -1.25
SPIN3-219ENST00000639053 LINC01554Q52M75 96 aa7.25□□□□□ -1.25
SPIN3-219ENST00000639053 M0R2T5 61 aa7.23□□□□□ -1.25
SPIN3-219ENST00000639053 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
SPIN3-219ENST00000639053 M0QZ58 72 aa7.17□□□□□ -1.26
SPIN3-219ENST00000639053 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
SPIN3-219ENST00000639053 A0A0D9SG42 100 aa7.1□□□□□ -1.27
SPIN3-219ENST00000639053 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
SPIN3-219ENST00000639053 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
SPIN3-219ENST00000639053 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
SPIN3-219ENST00000639053 MT2AP02795 61 aa7.01□□□□□ -1.29
SPIN3-219ENST00000639053 KRTAP12-1P59990 96 aa6.99□□□□□ -1.29
SPIN3-219ENST00000639053 ROMO1P60602 79 aa6.99□□□□□ -1.29
SPIN3-219ENST00000639053 R4GN34 69 aa6.99□□□□□ -1.29
SPIN3-219ENST00000639053 MT1FP04733 61 aa6.97□□□□□ -1.29
SPIN3-219ENST00000639053 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
SPIN3-219ENST00000639053 KRTAP10-10P60014 251 aa6.95□□□□□ -1.3
SPIN3-219ENST00000639053 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
SPIN3-219ENST00000639053 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
SPIN3-219ENST00000639053 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SPIN3-219ENST00000639053 KRTAP9-3Q9BYQ3 159 aa6.78□□□□□ -1.32
SPIN3-219ENST00000639053 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
SPIN3-219ENST00000639053 LCE2DQ5TA82 110 aaPredicted RBP6.73□□□□□ -1.33
SPIN3-219ENST00000639053 LCE2BO14633 110 aa6.63□□□□□ -1.35
SPIN3-219ENST00000639053 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
SPIN3-219ENST00000639053 H3BS24 57 aa6.6□□□□□ -1.35
SPIN3-219ENST00000639053 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
SPIN3-219ENST00000639053 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
SPIN3-219ENST00000639053 MT1BP07438 61 aa6.57□□□□□ -1.36
SPIN3-219ENST00000639053 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
SPIN3-219ENST00000639053 USH2AO75445 5202 aa6.48□□□□□ -1.37
SPIN3-219ENST00000639053 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
SPIN3-219ENST00000639053 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
SPIN3-219ENST00000639053 KRTAP9-2Q9BYQ4 174 aa6.37□□□□□ -1.39
SPIN3-219ENST00000639053 TNP1P09430 55 aa6.35□□□□□ -1.39
SPIN3-219ENST00000639053 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
SPIN3-219ENST00000639053 MT1XP80297 61 aa6.31□□□□□ -1.4
SPIN3-219ENST00000639053 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
SPIN3-219ENST00000639053 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
SPIN3-219ENST00000639053 FSIP2Q5CZC0 6907 aa6.24□□□□□ -1.41
SPIN3-219ENST00000639053 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
SPIN3-219ENST00000639053 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.41
SPIN3-219ENST00000639053 NDUFAF8A1L188 74 aa6.21□□□□□ -1.42
SPIN3-219ENST00000639053 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
SPIN3-219ENST00000639053 KRTAP10-7P60409 375 aaPredicted RBP6.06□□□□□ -1.44
SPIN3-219ENST00000639053 FCGBPQ9Y6R7 5405 aaPredicted RBP6.04□□□□□ -1.44
SPIN3-219ENST00000639053 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
SPIN3-219ENST00000639053 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
SPIN3-219ENST00000639053 KRTAP8-1Q8IUC2 63 aa5.93□□□□□ -1.46
SPIN3-219ENST00000639053 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
SPIN3-219ENST00000639053 LUZP6Q538Z0 58 aa5.9□□□□□ -1.46
SPIN3-219ENST00000639053 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
SPIN3-219ENST00000639053 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
SPIN3-219ENST00000639053 KMT2DO14686 5537 aa5.81□□□□□ -1.48
SPIN3-219ENST00000639053 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
SPIN3-219ENST00000639053 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
SPIN3-219ENST00000639053 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
SPIN3-219ENST00000639053 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
SPIN3-219ENST00000639053 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
SPIN3-219ENST00000639053 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
SPIN3-219ENST00000639053 A0A0A0MQY5 61 aa5.67□□□□□ -1.5
SPIN3-219ENST00000639053 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
SPIN3-219ENST00000639053 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms