RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 KRTAP13-4Q3LI77 160 aa5.62□□□□□ -1.51
SNIP1-204ENST00000638725 A0A0D9SG42 100 aa5.6□□□□□ -1.51
SNIP1-204ENST00000638725 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
SNIP1-204ENST00000638725 RPL37P61927 97 aaKnown RBP5.59□□□□□ -1.51
SNIP1-204ENST00000638725 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
SNIP1-204ENST00000638725 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
SNIP1-204ENST00000638725 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
SNIP1-204ENST00000638725 HSPG2P98160 4391 aa5.57□□□□□ -1.52
SNIP1-204ENST00000638725 S4R3F8 94 aa5.55□□□□□ -1.52
SNIP1-204ENST00000638725 TNXBP22105 4242 aa5.55□□□□□ -1.52
SNIP1-204ENST00000638725 RYR2Q92736 4967 aa5.54□□□□□ -1.52
SNIP1-204ENST00000638725 XP32Q5T750 250 aa5.53□□□□□ -1.52
SNIP1-204ENST00000638725 P0C880 135 aa5.52□□□□□ -1.53
SNIP1-204ENST00000638725 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
SNIP1-204ENST00000638725 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
SNIP1-204ENST00000638725 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.53
SNIP1-204ENST00000638725 KMT2CQ8NEZ4 4911 aaKnown RBP5.46□□□□□ -1.54
SNIP1-204ENST00000638725 Q5VSD8 79 aa5.46□□□□□ -1.54
SNIP1-204ENST00000638725 KRTAP21-3Q3LHN1 58 aa5.44□□□□□ -1.54
SNIP1-204ENST00000638725 KRTAP12-2P59991 146 aa5.44□□□□□ -1.54
SNIP1-204ENST00000638725 SPINT4Q6UDR6 99 aa5.4□□□□□ -1.54
SNIP1-204ENST00000638725 LPAP08519 4548 aa5.39□□□□□ -1.55
SNIP1-204ENST00000638725 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SNIP1-204ENST00000638725 KRTAP17-1Q9BYP8 105 aa5.37□□□□□ -1.55
SNIP1-204ENST00000638725 RYR1P21817 5038 aa5.36□□□□□ -1.55
SNIP1-204ENST00000638725 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
SNIP1-204ENST00000638725 LRP2P98164 4655 aa5.32□□□□□ -1.56
SNIP1-204ENST00000638725 M0QZ58 72 aa5.28□□□□□ -1.56
SNIP1-204ENST00000638725 KIAA1109Q2LD37 5005 aa5.28□□□□□ -1.56
SNIP1-204ENST00000638725 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SNIP1-204ENST00000638725 RYR3Q15413 4870 aa5.27□□□□□ -1.57
SNIP1-204ENST00000638725 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
SNIP1-204ENST00000638725 R4GN34 69 aa5.16□□□□□ -1.58
SNIP1-204ENST00000638725 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
SNIP1-204ENST00000638725 A0A0A0MQY5 61 aa5.12□□□□□ -1.59
SNIP1-204ENST00000638725 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
SNIP1-204ENST00000638725 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
SNIP1-204ENST00000638725 MUC17Q685J3 4493 aa5.07□□□□□ -1.6
SNIP1-204ENST00000638725 KRTAP4-5Q9BYR2 181 aa5.04□□□□□ -1.6
SNIP1-204ENST00000638725 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
SNIP1-204ENST00000638725 SEC61BP60468 96 aaKnown RBP5.03□□□□□ -1.6
SNIP1-204ENST00000638725 J3QL48 77 aa5□□□□□ -1.61
SNIP1-204ENST00000638725 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
SNIP1-204ENST00000638725 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
SNIP1-204ENST00000638725 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
SNIP1-204ENST00000638725 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
SNIP1-204ENST00000638725 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
SNIP1-204ENST00000638725 HERC2O95714 4834 aa4.81□□□□□ -1.64
SNIP1-204ENST00000638725 MUC2Q02817 5179 aa4.81□□□□□ -1.64
SNIP1-204ENST00000638725 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
SNIP1-204ENST00000638725 HERC1Q15751 4861 aa4.75□□□□□ -1.65
SNIP1-204ENST00000638725 TNP1P09430 55 aa4.74□□□□□ -1.65
SNIP1-204ENST00000638725 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
SNIP1-204ENST00000638725 BIRC6Q9NR09 4857 aa4.72□□□□□ -1.65
SNIP1-204ENST00000638725 PCLOQ9Y6V0 5065 aa4.71□□□□□ -1.66
SNIP1-204ENST00000638725 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
SNIP1-204ENST00000638725 FAT4Q6V0I7 4981 aa4.62□□□□□ -1.67
SNIP1-204ENST00000638725 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
SNIP1-204ENST00000638725 LCE2CQ5TA81 110 aa4.59□□□□□ -1.68
SNIP1-204ENST00000638725 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
SNIP1-204ENST00000638725 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
SNIP1-204ENST00000638725 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
SNIP1-204ENST00000638725 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
SNIP1-204ENST00000638725 M0R2T5 61 aa4.49□□□□□ -1.69
SNIP1-204ENST00000638725 MT1HP80294 61 aa4.45□□□□□ -1.7
SNIP1-204ENST00000638725 MT1FP04733 61 aa4.44□□□□□ -1.7
SNIP1-204ENST00000638725 KRTAP10-10P60014 251 aa4.43□□□□□ -1.7
SNIP1-204ENST00000638725 MT2AP02795 61 aa4.42□□□□□ -1.7
SNIP1-204ENST00000638725 UBR4Q5T4S7 5183 aa4.39□□□□□ -1.71
SNIP1-204ENST00000638725 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
SNIP1-204ENST00000638725 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
SNIP1-204ENST00000638725 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
SNIP1-204ENST00000638725 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
SNIP1-204ENST00000638725 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
SNIP1-204ENST00000638725 MT1BP07438 61 aa4.32□□□□□ -1.72
SNIP1-204ENST00000638725 MT1XP80297 61 aa4.31□□□□□ -1.72
SNIP1-204ENST00000638725 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
SNIP1-204ENST00000638725 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
SNIP1-204ENST00000638725 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
SNIP1-204ENST00000638725 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
SNIP1-204ENST00000638725 INE1O15225 51 aa4.21□□□□□ -1.73
SNIP1-204ENST00000638725 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
SNIP1-204ENST00000638725 LCE2BO14633 110 aa4.09□□□□□ -1.75
SNIP1-204ENST00000638725 KRTAP19-5Q3LI72 72 aa4.06□□□□□ -1.76
SNIP1-204ENST00000638725 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
SNIP1-204ENST00000638725 KMT2DO14686 5537 aa4□□□□□ -1.77
SNIP1-204ENST00000638725 USH2AO75445 5202 aa3.98□□□□□ -1.77
SNIP1-204ENST00000638725 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
SNIP1-204ENST00000638725 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
SNIP1-204ENST00000638725 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
SNIP1-204ENST00000638725 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
SNIP1-204ENST00000638725 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
SNIP1-204ENST00000638725 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
SNIP1-204ENST00000638725 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
SNIP1-204ENST00000638725 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
SNIP1-204ENST00000638725 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
SNIP1-204ENST00000638725 MT1LQ93083 61 aa3.74□□□□□ -1.81
SNIP1-204ENST00000638725 MT1EP04732 61 aa3.72□□□□□ -1.81
SNIP1-204ENST00000638725 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
SNIP1-204ENST00000638725 SSPOA2VEC9 5147 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms