RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 BSNQ9UPA5 3926 aa5.3□□□□□ -1.56
UBE3A-228ENST00000638155 ALMS1Q8TCU4 4167 aa5.28□□□□□ -1.56
UBE3A-228ENST00000638155 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
UBE3A-228ENST00000638155 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.58
UBE3A-228ENST00000638155 LCE3CQ5T5A8 94 aa5.08□□□□□ -1.6
UBE3A-228ENST00000638155 LYSTQ99698 3801 aa5.06□□□□□ -1.6
UBE3A-228ENST00000638155 DNAH1Q9P2D7 4330 aa5.04□□□□□ -1.6
UBE3A-228ENST00000638155 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
UBE3A-228ENST00000638155 KRTAP10-4P60372 401 aaPredicted RBP5.02□□□□□ -1.61
UBE3A-228ENST00000638155 DNAH7Q8WXX0 4024 aa5.02□□□□□ -1.61
UBE3A-228ENST00000638155 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
UBE3A-228ENST00000638155 SPRR2EP22531 72 aa4.96□□□□□ -1.62
UBE3A-228ENST00000638155 SPRR2BP35325 72 aa4.96□□□□□ -1.62
UBE3A-228ENST00000638155 SPRR2AP35326 72 aa4.96□□□□□ -1.62
UBE3A-228ENST00000638155 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
UBE3A-228ENST00000638155 ANK2Q01484 3957 aa4.91□□□□□ -1.62
UBE3A-228ENST00000638155 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
UBE3A-228ENST00000638155 HUWE1Q7Z6Z7 4374 aaKnown RBP4.89□□□□□ -1.63
UBE3A-228ENST00000638155 MT1HP80294 61 aa4.85□□□□□ -1.63
UBE3A-228ENST00000638155 SPRR2GQ9BYE4 73 aa4.85□□□□□ -1.63
UBE3A-228ENST00000638155 DNAH3Q8TD57 4116 aa4.85□□□□□ -1.63
UBE3A-228ENST00000638155 KRTAP12-4P60329 112 aa4.84□□□□□ -1.64
UBE3A-228ENST00000638155 SPRR2DP22532 72 aa4.83□□□□□ -1.64
UBE3A-228ENST00000638155 ZNF469Q96JG9 3925 aaPredicted RBP4.82□□□□□ -1.64
UBE3A-228ENST00000638155 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
UBE3A-228ENST00000638155 ANK3Q12955 4377 aaKnown RBP4.8□□□□□ -1.64
UBE3A-228ENST00000638155 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
UBE3A-228ENST00000638155 LCE2BO14633 110 aa4.77□□□□□ -1.65
UBE3A-228ENST00000638155 KMT2AQ03164 3969 aa4.74□□□□□ -1.65
UBE3A-228ENST00000638155 FRAS1Q86XX4 4008 aa4.74□□□□□ -1.65
UBE3A-228ENST00000638155 MT2AP02795 61 aa4.68□□□□□ -1.66
UBE3A-228ENST00000638155 DNAH6Q9C0G6 4158 aa4.66□□□□□ -1.66
UBE3A-228ENST00000638155 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
UBE3A-228ENST00000638155 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
UBE3A-228ENST00000638155 MT1GP13640 62 aa4.56□□□□□ -1.68
UBE3A-228ENST00000638155 MT1FP04733 61 aa4.56□□□□□ -1.68
UBE3A-228ENST00000638155 LCE2CQ5TA81 110 aa4.55□□□□□ -1.68
UBE3A-228ENST00000638155 KRTAP4-1Q9BYQ7 146 aa4.55□□□□□ -1.68
UBE3A-228ENST00000638155 MT3P25713 68 aa4.54□□□□□ -1.68
UBE3A-228ENST00000638155 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
UBE3A-228ENST00000638155 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
UBE3A-228ENST00000638155 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
UBE3A-228ENST00000638155 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
UBE3A-228ENST00000638155 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
UBE3A-228ENST00000638155 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
UBE3A-228ENST00000638155 PRM1P04553 51 aa4.3□□□□□ -1.72
UBE3A-228ENST00000638155 MT1XP80297 61 aa4.28□□□□□ -1.72
UBE3A-228ENST00000638155 DNAH9Q9NYC9 4486 aa4.28□□□□□ -1.72
UBE3A-228ENST00000638155 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
UBE3A-228ENST00000638155 MT4P47944 62 aa4.26□□□□□ -1.73
UBE3A-228ENST00000638155 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
UBE3A-228ENST00000638155 DNAH10Q8IVF4 4471 aa4.25□□□□□ -1.73
UBE3A-228ENST00000638155 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
UBE3A-228ENST00000638155 DYNC2H1Q8NCM8 4307 aaKnown RBP4.2□□□□□ -1.74
UBE3A-228ENST00000638155 VPS13DQ5THJ4 4388 aa4.2□□□□□ -1.74
UBE3A-228ENST00000638155 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
UBE3A-228ENST00000638155 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
UBE3A-228ENST00000638155 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
UBE3A-228ENST00000638155 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
UBE3A-228ENST00000638155 DNAH11Q96DT5 4516 aa4.11□□□□□ -1.75
UBE3A-228ENST00000638155 MT1LQ93083 61 aa4.11□□□□□ -1.75
UBE3A-228ENST00000638155 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
UBE3A-228ENST00000638155 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
UBE3A-228ENST00000638155 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
UBE3A-228ENST00000638155 KRTAP4-8Q9BYQ9 185 aa4.08□□□□□ -1.76
UBE3A-228ENST00000638155 LRP1Q07954 4544 aaKnown RBP4.04□□□□□ -1.76
UBE3A-228ENST00000638155 MT1BP07438 61 aa3.99□□□□□ -1.77
UBE3A-228ENST00000638155 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
UBE3A-228ENST00000638155 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
UBE3A-228ENST00000638155 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
UBE3A-228ENST00000638155 KRTAP9-2Q9BYQ4 174 aa3.92□□□□□ -1.78
UBE3A-228ENST00000638155 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
UBE3A-228ENST00000638155 DNHD1Q96M86 4753 aa3.91□□□□□ -1.78
UBE3A-228ENST00000638155 STARD9Q9P2P6 4700 aa3.91□□□□□ -1.78
UBE3A-228ENST00000638155 KRTAP4-7Q9BYR0 210 aa3.91□□□□□ -1.78
UBE3A-228ENST00000638155 MT1EP04732 61 aa3.9□□□□□ -1.78
UBE3A-228ENST00000638155 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
UBE3A-228ENST00000638155 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
UBE3A-228ENST00000638155 MT1MQ8N339 61 aa3.85□□□□□ -1.79
UBE3A-228ENST00000638155 PKD1P98161 4303 aa3.84□□□□□ -1.79
UBE3A-228ENST00000638155 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
UBE3A-228ENST00000638155 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
UBE3A-228ENST00000638155 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
UBE3A-228ENST00000638155 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
UBE3A-228ENST00000638155 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
UBE3A-228ENST00000638155 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
UBE3A-228ENST00000638155 KRTAP9-6A0A140TA67 174 aa3.8□□□□□ -1.8
UBE3A-228ENST00000638155 PLECQ15149 4684 aaKnown RBP3.8□□□□□ -1.8
UBE3A-228ENST00000638155 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
UBE3A-228ENST00000638155 FAT1Q14517 4588 aa3.76□□□□□ -1.81
UBE3A-228ENST00000638155 KRTAP17-1Q9BYP8 105 aa3.71□□□□□ -1.82
UBE3A-228ENST00000638155 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
UBE3A-228ENST00000638155 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
UBE3A-228ENST00000638155 TNXBP22105 4242 aa3.69□□□□□ -1.82
UBE3A-228ENST00000638155 HSPG2P98160 4391 aa3.69□□□□□ -1.82
UBE3A-228ENST00000638155 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
UBE3A-228ENST00000638155 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
UBE3A-228ENST00000638155 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
UBE3A-228ENST00000638155 FAT3Q8TDW7 4589 aa3.65□□□□□ -1.83
UBE3A-228ENST00000638155 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms