RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
CLN6-215ENST00000636674 KRTAP17-1Q9BYP8 105 aa7.81□□□□□ -1.16
CLN6-215ENST00000636674 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
CLN6-215ENST00000636674 H0YAA0 97 aa7.78□□□□□ -1.16
CLN6-215ENST00000636674 SMR3BP02814 79 aaPredicted RBP7.78□□□□□ -1.16
CLN6-215ENST00000636674 LINC01554Q52M75 96 aa7.78□□□□□ -1.16
CLN6-215ENST00000636674 KRTAP4-5Q9BYR2 181 aa7.78□□□□□ -1.16
CLN6-215ENST00000636674 A0A1B0GU33 70 aa7.72□□□□□ -1.17
CLN6-215ENST00000636674 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.17
CLN6-215ENST00000636674 Q5VSD8 79 aa7.71□□□□□ -1.17
CLN6-215ENST00000636674 COX6B2Q6YFQ2 88 aa7.7□□□□□ -1.18
CLN6-215ENST00000636674 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
CLN6-215ENST00000636674 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
CLN6-215ENST00000636674 MYCBP2O75592 4640 aa7.58□□□□□ -1.2
CLN6-215ENST00000636674 FAT3Q8TDW7 4589 aa7.56□□□□□ -1.2
CLN6-215ENST00000636674 TNXBP22105 4242 aa7.55□□□□□ -1.2
CLN6-215ENST00000636674 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.2
CLN6-215ENST00000636674 KRTAP10-8P60410 259 aa7.52□□□□□ -1.21
CLN6-215ENST00000636674 K7ERS5 55 aa7.51□□□□□ -1.21
CLN6-215ENST00000636674 RPL37P61927 97 aaKnown RBP7.51□□□□□ -1.21
CLN6-215ENST00000636674 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
CLN6-215ENST00000636674 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
CLN6-215ENST00000636674 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
CLN6-215ENST00000636674 HERC1Q15751 4861 aa7.46□□□□□ -1.22
CLN6-215ENST00000636674 XP32Q5T750 250 aa7.43□□□□□ -1.22
CLN6-215ENST00000636674 S4R3F8 94 aa7.4□□□□□ -1.23
CLN6-215ENST00000636674 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
CLN6-215ENST00000636674 ROMO1P60602 79 aa7.37□□□□□ -1.23
CLN6-215ENST00000636674 MT1HL1P0DM35 61 aa7.33□□□□□ -1.24
CLN6-215ENST00000636674 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
CLN6-215ENST00000636674 LCE2AQ5TA79 106 aaPredicted RBP7.29□□□□□ -1.24
CLN6-215ENST00000636674 LCE2BO14633 110 aa7.27□□□□□ -1.25
CLN6-215ENST00000636674 P0C880 135 aa7.27□□□□□ -1.25
CLN6-215ENST00000636674 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
CLN6-215ENST00000636674 HMCN2Q8NDA2 5059 aa7.26□□□□□ -1.25
CLN6-215ENST00000636674 A0A0D9SG42 100 aa7.25□□□□□ -1.25
CLN6-215ENST00000636674 CRIPTQ9P021 101 aa7.24□□□□□ -1.25
CLN6-215ENST00000636674 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
CLN6-215ENST00000636674 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
CLN6-215ENST00000636674 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
CLN6-215ENST00000636674 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
CLN6-215ENST00000636674 M0QZ58 72 aa7.11□□□□□ -1.27
CLN6-215ENST00000636674 LOC100996750A0A140TA64 210 aa7.08□□□□□ -1.28
CLN6-215ENST00000636674 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
CLN6-215ENST00000636674 LRP2P98164 4655 aa7.04□□□□□ -1.28
CLN6-215ENST00000636674 LPAP08519 4548 aa7.03□□□□□ -1.28
CLN6-215ENST00000636674 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
CLN6-215ENST00000636674 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
CLN6-215ENST00000636674 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
CLN6-215ENST00000636674 LORP23490 312 aaPredicted RBP6.96□□□□□ -1.29
CLN6-215ENST00000636674 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
CLN6-215ENST00000636674 R4GN34 69 aa6.84□□□□□ -1.31
CLN6-215ENST00000636674 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
CLN6-215ENST00000636674 RNF213Q63HN8 5207 aa6.82□□□□□ -1.32
CLN6-215ENST00000636674 KRTAP4-1Q9BYQ7 146 aa6.72□□□□□ -1.33
CLN6-215ENST00000636674 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
CLN6-215ENST00000636674 KRTAP19-2Q3LHN2 52 aa6.7□□□□□ -1.34
CLN6-215ENST00000636674 MUC2Q02817 5179 aa6.64□□□□□ -1.35
CLN6-215ENST00000636674 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
CLN6-215ENST00000636674 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
CLN6-215ENST00000636674 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
CLN6-215ENST00000636674 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
CLN6-215ENST00000636674 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
CLN6-215ENST00000636674 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
CLN6-215ENST00000636674 TNP1P09430 55 aa6.31□□□□□ -1.4
CLN6-215ENST00000636674 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
CLN6-215ENST00000636674 MT1HP80294 61 aa6.21□□□□□ -1.41
CLN6-215ENST00000636674 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
CLN6-215ENST00000636674 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.43
CLN6-215ENST00000636674 KRTAP9-2Q9BYQ4 174 aa6.11□□□□□ -1.43
CLN6-215ENST00000636674 M0R2T5 61 aa6.08□□□□□ -1.44
CLN6-215ENST00000636674 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
CLN6-215ENST00000636674 MT2AP02795 61 aa5.97□□□□□ -1.45
CLN6-215ENST00000636674 MT1FP04733 61 aa5.96□□□□□ -1.45
CLN6-215ENST00000636674 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
CLN6-215ENST00000636674 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
CLN6-215ENST00000636674 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
CLN6-215ENST00000636674 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
CLN6-215ENST00000636674 KRTAP9-6A0A140TA67 174 aa5.87□□□□□ -1.47
CLN6-215ENST00000636674 KRTAP5-3Q6L8H2 238 aa5.87□□□□□ -1.47
CLN6-215ENST00000636674 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
CLN6-215ENST00000636674 MT1BP07438 61 aa5.82□□□□□ -1.48
CLN6-215ENST00000636674 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
CLN6-215ENST00000636674 KRTAP10-5P60370 271 aa5.8□□□□□ -1.48
CLN6-215ENST00000636674 MT1XP80297 61 aa5.79□□□□□ -1.48
CLN6-215ENST00000636674 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
CLN6-215ENST00000636674 KRTAP4-8A0A0G2JLE6 195 aa5.73□□□□□ -1.49
CLN6-215ENST00000636674 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
CLN6-215ENST00000636674 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
CLN6-215ENST00000636674 USH2AO75445 5202 aa5.71□□□□□ -1.49
CLN6-215ENST00000636674 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
CLN6-215ENST00000636674 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
CLN6-215ENST00000636674 KRTAP12-3P60328 96 aa5.67□□□□□ -1.5
CLN6-215ENST00000636674 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
CLN6-215ENST00000636674 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
CLN6-215ENST00000636674 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
CLN6-215ENST00000636674 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
CLN6-215ENST00000636674 INE1O15225 51 aa5.57□□□□□ -1.52
CLN6-215ENST00000636674 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
CLN6-215ENST00000636674 FCGBPQ9Y6R7 5405 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms