RNA–Protein interactions for RNA: ENST00000636157.1

SMARCA2-247, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 3,211 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-247ENST00000636157 DNAH11Q96DT5 4516 aa3.75□□□□□ -1.81
SMARCA2-247ENST00000636157 C9orf92A6NGG3 77 aa3.74□□□□□ -1.81
SMARCA2-247ENST00000636157 KRTAP10-2P60368 255 aa3.72□□□□□ -1.81
SMARCA2-247ENST00000636157 KRTAP3-3Q9BYR6 98 aa3.72□□□□□ -1.81
SMARCA2-247ENST00000636157 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
SMARCA2-247ENST00000636157 PRO2289Q9P1D8 64 aa3.69□□□□□ -1.82
SMARCA2-247ENST00000636157 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
SMARCA2-247ENST00000636157 KRTAP10-1P60331 282 aa3.68□□□□□ -1.82
SMARCA2-247ENST00000636157 R4GN34 69 aa3.68□□□□□ -1.82
SMARCA2-247ENST00000636157 DNAH5Q8TE73 4624 aa3.68□□□□□ -1.82
SMARCA2-247ENST00000636157 LRP1BQ9NZR2 4599 aa3.67□□□□□ -1.82
SMARCA2-247ENST00000636157 VPS13BQ7Z7G8 4022 aa3.64□□□□□ -1.83
SMARCA2-247ENST00000636157 M0QZ58 72 aa3.63□□□□□ -1.83
SMARCA2-247ENST00000636157 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
SMARCA2-247ENST00000636157 FAT2Q9NYQ8 4349 aa3.6□□□□□ -1.83
SMARCA2-247ENST00000636157 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
SMARCA2-247ENST00000636157 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
SMARCA2-247ENST00000636157 PKD1P98161 4303 aa3.57□□□□□ -1.84
SMARCA2-247ENST00000636157 PKHD1L1Q86WI1 4243 aa3.56□□□□□ -1.84
SMARCA2-247ENST00000636157 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
SMARCA2-247ENST00000636157 RYR2Q92736 4967 aa3.55□□□□□ -1.84
SMARCA2-247ENST00000636157 INE1O15225 51 aa3.51□□□□□ -1.85
SMARCA2-247ENST00000636157 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
SMARCA2-247ENST00000636157 PKHD1P08F94 4074 aa3.5□□□□□ -1.85
SMARCA2-247ENST00000636157 SMR3BP02814 79 aaPredicted RBP3.49□□□□□ -1.85
SMARCA2-247ENST00000636157 DYNC1H1Q14204 4646 aaKnown RBP3.49□□□□□ -1.85
SMARCA2-247ENST00000636157 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
SMARCA2-247ENST00000636157 BIRC6Q9NR09 4857 aa3.47□□□□□ -1.85
SMARCA2-247ENST00000636157 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
SMARCA2-247ENST00000636157 KRTAP10-4P60372 401 aaPredicted RBP3.46□□□□□ -1.86
SMARCA2-247ENST00000636157 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
SMARCA2-247ENST00000636157 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
SMARCA2-247ENST00000636157 RYR3Q15413 4870 aa3.41□□□□□ -1.86
SMARCA2-247ENST00000636157 HERC2O95714 4834 aa3.4□□□□□ -1.87
SMARCA2-247ENST00000636157 TNXBP22105 4242 aa3.39□□□□□ -1.87
SMARCA2-247ENST00000636157 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
SMARCA2-247ENST00000636157 FAT3Q8TDW7 4589 aa3.37□□□□□ -1.87
SMARCA2-247ENST00000636157 HSPG2P98160 4391 aa3.36□□□□□ -1.87
SMARCA2-247ENST00000636157 FAT1Q14517 4588 aa3.35□□□□□ -1.87
SMARCA2-247ENST00000636157 KIAA1109Q2LD37 5005 aa3.33□□□□□ -1.88
SMARCA2-247ENST00000636157 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
SMARCA2-247ENST00000636157 Q5VSD8 79 aa3.31□□□□□ -1.88
SMARCA2-247ENST00000636157 TNP1P09430 55 aa3.29□□□□□ -1.88
SMARCA2-247ENST00000636157 RYR1P21817 5038 aa3.27□□□□□ -1.89
SMARCA2-247ENST00000636157 LORP23490 312 aaPredicted RBP3.26□□□□□ -1.89
SMARCA2-247ENST00000636157 KRTAP17-1Q9BYP8 105 aa3.23□□□□□ -1.89
SMARCA2-247ENST00000636157 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
SMARCA2-247ENST00000636157 LPAP08519 4548 aa3.2□□□□□ -1.9
SMARCA2-247ENST00000636157 MT1HL1P0DM35 61 aa3.15□□□□□ -1.9
SMARCA2-247ENST00000636157 LRP2P98164 4655 aa3.12□□□□□ -1.91
SMARCA2-247ENST00000636157 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
SMARCA2-247ENST00000636157 PCLOQ9Y6V0 5065 aa3.09□□□□□ -1.91
SMARCA2-247ENST00000636157 MUC17Q685J3 4493 aa3.08□□□□□ -1.92
SMARCA2-247ENST00000636157 LCE2DQ5TA82 110 aaPredicted RBP3.07□□□□□ -1.92
SMARCA2-247ENST00000636157 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
SMARCA2-247ENST00000636157 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
SMARCA2-247ENST00000636157 HERC1Q15751 4861 aa3□□□□□ -1.93
SMARCA2-247ENST00000636157 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
SMARCA2-247ENST00000636157 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SMARCA2-247ENST00000636157 FLGP20930 4061 aaPredicted RBP2.95□□□□□ -1.94
SMARCA2-247ENST00000636157 MUC2Q02817 5179 aa2.94□□□□□ -1.94
SMARCA2-247ENST00000636157 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
SMARCA2-247ENST00000636157 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
SMARCA2-247ENST00000636157 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
SMARCA2-247ENST00000636157 RNF213Q63HN8 5207 aa2.89□□□□□ -1.95
SMARCA2-247ENST00000636157 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
SMARCA2-247ENST00000636157 LCE2AQ5TA79 106 aaPredicted RBP2.88□□□□□ -1.95
SMARCA2-247ENST00000636157 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
SMARCA2-247ENST00000636157 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
SMARCA2-247ENST00000636157 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
SMARCA2-247ENST00000636157 FAT4Q6V0I7 4981 aa2.8□□□□□ -1.96
SMARCA2-247ENST00000636157 M0R2T5 61 aa2.77□□□□□ -1.97
SMARCA2-247ENST00000636157 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
SMARCA2-247ENST00000636157 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
SMARCA2-247ENST00000636157 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
SMARCA2-247ENST00000636157 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
SMARCA2-247ENST00000636157 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
SMARCA2-247ENST00000636157 KRTAP19-8Q3LI54 63 aa2.7□□□□□ -1.98
SMARCA2-247ENST00000636157 MT1XP80297 61 aa2.7□□□□□ -1.98
SMARCA2-247ENST00000636157 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
SMARCA2-247ENST00000636157 LOC100996750A0A140TA64 210 aa2.7□□□□□ -1.98
SMARCA2-247ENST00000636157 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
SMARCA2-247ENST00000636157 MT1HP80294 61 aa2.66□□□□□ -1.98
SMARCA2-247ENST00000636157 MT1FP04733 61 aa2.65□□□□□ -1.99
SMARCA2-247ENST00000636157 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
SMARCA2-247ENST00000636157 MT2AP02795 61 aa2.64□□□□□ -1.99
SMARCA2-247ENST00000636157 MT1BP07438 61 aa2.64□□□□□ -1.99
SMARCA2-247ENST00000636157 KRTAP10-7P60409 375 aaPredicted RBP2.64□□□□□ -1.99
SMARCA2-247ENST00000636157 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
SMARCA2-247ENST00000636157 KRTAP9-8Q9BYQ0 159 aa2.59□□□□□ -1.99
SMARCA2-247ENST00000636157 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -2
SMARCA2-247ENST00000636157 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
SMARCA2-247ENST00000636157 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
SMARCA2-247ENST00000636157 KRTAP12-4P60329 112 aa2.57□□□□□ -2
SMARCA2-247ENST00000636157 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
SMARCA2-247ENST00000636157 LCE1AQ5T7P2 110 aa2.55□□□□□ -2
SMARCA2-247ENST00000636157 LCE1EQ5T753 118 aa2.53□□□□□ -2.01
SMARCA2-247ENST00000636157 CRCT1Q9UGL9 99 aa2.52□□□□□ -2.01
SMARCA2-247ENST00000636157 LCE2BO14633 110 aa2.51□□□□□ -2.01
SMARCA2-247ENST00000636157 USH2AO75445 5202 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms