RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 MT1HP80294 61 aa2.71□□□□□ -1.98
CHD2-208ENST00000626874 SPENQ96T58 3664 aaKnown RBP2.7□□□□□ -1.98
CHD2-208ENST00000626874 BSNQ9UPA5 3926 aa2.68□□□□□ -1.98
CHD2-208ENST00000626874 KRTAP12-4P60329 112 aa2.65□□□□□ -1.98
CHD2-208ENST00000626874 SPRR2EP22531 72 aa2.65□□□□□ -1.99
CHD2-208ENST00000626874 SPRR2BP35325 72 aa2.65□□□□□ -1.99
CHD2-208ENST00000626874 SPRR2AP35326 72 aa2.65□□□□□ -1.99
CHD2-208ENST00000626874 CSMD1Q96PZ7 3565 aa2.65□□□□□ -1.99
CHD2-208ENST00000626874 ANK3Q12955 4377 aaKnown RBP2.64□□□□□ -1.99
CHD2-208ENST00000626874 MT2AP02795 61 aa2.64□□□□□ -1.99
CHD2-208ENST00000626874 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
CHD2-208ENST00000626874 CSMD2Q7Z408 3487 aa2.63□□□□□ -1.99
CHD2-208ENST00000626874 AKAP9Q99996 3911 aa2.62□□□□□ -1.99
CHD2-208ENST00000626874 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
CHD2-208ENST00000626874 SPRR2DP22532 72 aa2.6□□□□□ -1.99
CHD2-208ENST00000626874 LCE2BO14633 110 aa2.59□□□□□ -1.99
CHD2-208ENST00000626874 DNAH2Q9P225 4427 aa2.55□□□□□ -2
CHD2-208ENST00000626874 MT1FP04733 61 aa2.53□□□□□ -2
CHD2-208ENST00000626874 DNAH7Q8WXX0 4024 aa2.53□□□□□ -2.01
CHD2-208ENST00000626874 VPS13CQ709C8 3753 aa2.51□□□□□ -2.01
CHD2-208ENST00000626874 KRTAP4-1Q9BYQ7 146 aa2.5□□□□□ -2.01
CHD2-208ENST00000626874 CUBNO60494 3623 aa2.49□□□□□ -2.01
CHD2-208ENST00000626874 KRTAP19-8Q3LI54 63 aa2.48□□□□□ -2.01
CHD2-208ENST00000626874 MT1GP13640 62 aa2.47□□□□□ -2.01
CHD2-208ENST00000626874 DNAH3Q8TD57 4116 aa2.46□□□□□ -2.01
CHD2-208ENST00000626874 SVEP1Q4LDE5 3571 aa2.46□□□□□ -2.02
CHD2-208ENST00000626874 MT3P25713 68 aa2.45□□□□□ -2.02
CHD2-208ENST00000626874 CMYA5Q8N3K9 4069 aa2.45□□□□□ -2.02
CHD2-208ENST00000626874 ZNF469Q96JG9 3925 aaPredicted RBP2.45□□□□□ -2.02
CHD2-208ENST00000626874 LCE2CQ5TA81 110 aa2.44□□□□□ -2.02
CHD2-208ENST00000626874 LCE3BQ5TA77 95 aa2.44□□□□□ -2.02
CHD2-208ENST00000626874 DNHD1Q96M86 4753 aa2.44□□□□□ -2.02
CHD2-208ENST00000626874 DNAH6Q9C0G6 4158 aa2.43□□□□□ -2.02
CHD2-208ENST00000626874 FAT2Q9NYQ8 4349 aa2.43□□□□□ -2.02
CHD2-208ENST00000626874 CSMD3Q7Z407 3707 aa2.42□□□□□ -2.02
CHD2-208ENST00000626874 ANK2Q01484 3957 aa2.4□□□□□ -2.02
CHD2-208ENST00000626874 DNAH10Q8IVF4 4471 aa2.4□□□□□ -2.03
CHD2-208ENST00000626874 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.03
CHD2-208ENST00000626874 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
CHD2-208ENST00000626874 DNAH11Q96DT5 4516 aa2.39□□□□□ -2.03
CHD2-208ENST00000626874 DNAH17Q9UFH2 4485 aa2.38□□□□□ -2.03
CHD2-208ENST00000626874 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
CHD2-208ENST00000626874 LCE2DQ5TA82 110 aaPredicted RBP2.38□□□□□ -2.03
CHD2-208ENST00000626874 FRAS1Q86XX4 4008 aa2.38□□□□□ -2.03
CHD2-208ENST00000626874 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
CHD2-208ENST00000626874 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
CHD2-208ENST00000626874 DYNC2H1Q8NCM8 4307 aaKnown RBP2.35□□□□□ -2.03
CHD2-208ENST00000626874 KRTAP19-1Q8IUB9 90 aa2.33□□□□□ -2.04
CHD2-208ENST00000626874 HECTD4Q9Y4D8 3996 aa2.33□□□□□ -2.04
CHD2-208ENST00000626874 MT1XP80297 61 aa2.33□□□□□ -2.04
CHD2-208ENST00000626874 LYSTQ99698 3801 aa2.32□□□□□ -2.04
CHD2-208ENST00000626874 DNAH5Q8TE73 4624 aa2.32□□□□□ -2.04
CHD2-208ENST00000626874 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
CHD2-208ENST00000626874 PKHD1L1Q86WI1 4243 aa2.3□□□□□ -2.04
CHD2-208ENST00000626874 MT1LQ93083 61 aa2.29□□□□□ -2.04
CHD2-208ENST00000626874 PLECQ15149 4684 aaKnown RBP2.29□□□□□ -2.04
CHD2-208ENST00000626874 KMT2AQ03164 3969 aa2.27□□□□□ -2.05
CHD2-208ENST00000626874 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
CHD2-208ENST00000626874 VPS13DQ5THJ4 4388 aa2.26□□□□□ -2.05
CHD2-208ENST00000626874 DYNC1H1Q14204 4646 aaKnown RBP2.26□□□□□ -2.05
CHD2-208ENST00000626874 PRKDCP78527 4128 aaKnown RBP2.26□□□□□ -2.05
CHD2-208ENST00000626874 KRTAP9-8Q9BYQ0 159 aa2.26□□□□□ -2.05
CHD2-208ENST00000626874 MT1BP07438 61 aa2.25□□□□□ -2.05
CHD2-208ENST00000626874 KRTAP9-3Q9BYQ3 159 aa2.23□□□□□ -2.05
CHD2-208ENST00000626874 DNAH8Q96JB1 4490 aa2.21□□□□□ -2.06
CHD2-208ENST00000626874 MT4P47944 62 aa2.2□□□□□ -2.06
CHD2-208ENST00000626874 STARD9Q9P2P6 4700 aa2.19□□□□□ -2.06
CHD2-208ENST00000626874 FAT1Q14517 4588 aa2.19□□□□□ -2.06
CHD2-208ENST00000626874 FLGP20930 4061 aaPredicted RBP2.18□□□□□ -2.06
CHD2-208ENST00000626874 LRP1BQ9NZR2 4599 aa2.18□□□□□ -2.06
CHD2-208ENST00000626874 APOBP04114 4563 aaKnown RBP2.18□□□□□ -2.06
CHD2-208ENST00000626874 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
CHD2-208ENST00000626874 KRTAP9-2Q9BYQ4 174 aa2.17□□□□□ -2.06
CHD2-208ENST00000626874 MT1EP04732 61 aa2.17□□□□□ -2.06
CHD2-208ENST00000626874 KRTAP20-1Q3LI63 56 aa2.17□□□□□ -2.06
CHD2-208ENST00000626874 KRTAP17-1Q9BYP8 105 aa2.17□□□□□ -2.06
CHD2-208ENST00000626874 KRTAP19-6Q3LI70 58 aa2.16□□□□□ -2.06
CHD2-208ENST00000626874 RYR1P21817 5038 aa2.16□□□□□ -2.06
CHD2-208ENST00000626874 PKD1P98161 4303 aa2.16□□□□□ -2.06
CHD2-208ENST00000626874 KIAA1109Q2LD37 5005 aa2.16□□□□□ -2.06
CHD2-208ENST00000626874 KRTAP9-6A0A140TA67 174 aa2.16□□□□□ -2.06
CHD2-208ENST00000626874 RYR2Q92736 4967 aa2.15□□□□□ -2.06
CHD2-208ENST00000626874 BIRC6Q9NR09 4857 aa2.15□□□□□ -2.07
CHD2-208ENST00000626874 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
CHD2-208ENST00000626874 KRTAP4-8A0A0G2JLE6 195 aa2.14□□□□□ -2.07
CHD2-208ENST00000626874 KRTAP4-8Q9BYQ9 185 aa2.14□□□□□ -2.07
CHD2-208ENST00000626874 MT1MQ8N339 61 aa2.14□□□□□ -2.07
CHD2-208ENST00000626874 RYR3Q15413 4870 aa2.14□□□□□ -2.07
CHD2-208ENST00000626874 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
CHD2-208ENST00000626874 LCE1DQ5T752 114 aa2.13□□□□□ -2.07
CHD2-208ENST00000626874 PCLOQ9Y6V0 5065 aa2.13□□□□□ -2.07
CHD2-208ENST00000626874 MYCBP2O75592 4640 aa2.09□□□□□ -2.08
CHD2-208ENST00000626874 HSPG2P98160 4391 aa2.08□□□□□ -2.08
CHD2-208ENST00000626874 PKHD1P08F94 4074 aa2.08□□□□□ -2.08
CHD2-208ENST00000626874 KMT2CQ8NEZ4 4911 aaKnown RBP2.08□□□□□ -2.08
CHD2-208ENST00000626874 LCE1AQ5T7P2 110 aa2.07□□□□□ -2.08
CHD2-208ENST00000626874 KRTAP2-3P0C7H8 128 aa2.07□□□□□ -2.08
CHD2-208ENST00000626874 KRTAP2-4Q9BYR9 128 aa2.07□□□□□ -2.08
CHD2-208ENST00000626874 HERC2O95714 4834 aa2.07□□□□□ -2.08
CHD2-208ENST00000626874 LCE5AQ5TCM9 118 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms