RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 CYP4F30PQ9H0H9 118 aa10.21□□□□□ -0.77
CPSF1-214ENST00000622776 SPRR2FQ96RM1 72 aa10.13□□□□□ -0.79
CPSF1-214ENST00000622776 PRO0461Q9UI25 63 aa10.13□□□□□ -0.79
CPSF1-214ENST00000622776 SPRR2EP22531 72 aa10.09□□□□□ -0.79
CPSF1-214ENST00000622776 SPRR2BP35325 72 aa10.09□□□□□ -0.79
CPSF1-214ENST00000622776 SPRR2AP35326 72 aa10.09□□□□□ -0.79
CPSF1-214ENST00000622776 H0YAA0 97 aa10.07□□□□□ -0.8
CPSF1-214ENST00000622776 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
CPSF1-214ENST00000622776 TRAV22A0A0B4J277 110 aa10.04□□□□□ -0.8
CPSF1-214ENST00000622776 NDUFC1O43677 76 aa10.04□□□□□ -0.8
CPSF1-214ENST00000622776 PRO2289Q9P1D8 64 aa10.03□□□□□ -0.8
CPSF1-214ENST00000622776 K7EP34 96 aa10□□□□□ -0.81
CPSF1-214ENST00000622776 MT1XP80297 61 aa10□□□□□ -0.81
CPSF1-214ENST00000622776 A8MUN3 132 aa9.98□□□□□ -0.81
CPSF1-214ENST00000622776 ADM2Q7Z4H4 148 aa9.96□□□□□ -0.82
CPSF1-214ENST00000622776 COL5A1-AS1Q5SY13 56 aa9.95□□□□□ -0.82
CPSF1-214ENST00000622776 KRTAP8-1Q8IUC2 63 aa9.94□□□□□ -0.82
CPSF1-214ENST00000622776 LCE1AQ5T7P2 110 aa9.9□□□□□ -0.82
CPSF1-214ENST00000622776 PLAC4Q8WY50 150 aa9.9□□□□□ -0.82
CPSF1-214ENST00000622776 KRTAP2-2Q9BYT5 123 aa9.88□□□□□ -0.83
CPSF1-214ENST00000622776 KRTAP2-1Q9BYU5 128 aa9.88□□□□□ -0.83
CPSF1-214ENST00000622776 ACYP1P07311 99 aa9.85□□□□□ -0.83
CPSF1-214ENST00000622776 KRTAP12-2P59991 146 aa9.84□□□□□ -0.83
CPSF1-214ENST00000622776 ETDBQ3ZM63 59 aa9.83□□□□□ -0.84
CPSF1-214ENST00000622776 H0Y9P7 68 aa9.82□□□□□ -0.84
CPSF1-214ENST00000622776 UQCRQO14949 82 aa9.82□□□□□ -0.84
CPSF1-214ENST00000622776 ATOX1O00244 68 aa9.81□□□□□ -0.84
CPSF1-214ENST00000622776 A0A1B0GV90 55 aa9.79□□□□□ -0.84
CPSF1-214ENST00000622776 F8W1H4 67 aa9.78□□□□□ -0.84
CPSF1-214ENST00000622776 GTF2H5Q6ZYL4 71 aa9.77□□□□□ -0.85
CPSF1-214ENST00000622776 SPRR2DP22532 72 aa9.76□□□□□ -0.85
CPSF1-214ENST00000622776 R4GN34 69 aa9.74□□□□□ -0.85
CPSF1-214ENST00000622776 KRTAP4-8A0A0G2JLE6 195 aa9.72□□□□□ -0.85
CPSF1-214ENST00000622776 KRTAP4-8Q9BYQ9 185 aa9.72□□□□□ -0.85
CPSF1-214ENST00000622776 HIST1H4AP62805 103 aaKnown RBP9.69□□□□□ -0.86
CPSF1-214ENST00000622776 P0C880 135 aa9.68□□□□□ -0.86
CPSF1-214ENST00000622776 ATP5EP2Q5VTU8 51 aa9.66□□□□□ -0.86
CPSF1-214ENST00000622776 M0QZ58 72 aa9.64□□□□□ -0.87
CPSF1-214ENST00000622776 C20orf197Q8N268 126 aa9.63□□□□□ -0.87
CPSF1-214ENST00000622776 LINC00208Q96KT6 92 aa9.63□□□□□ -0.87
CPSF1-214ENST00000622776 FAM240AA0A1B0GVK7 77 aa9.54□□□□□ -0.88
CPSF1-214ENST00000622776 KRTAP10-7P60409 375 aaPredicted RBP9.54□□□□□ -0.88
CPSF1-214ENST00000622776 LINC01554Q52M75 96 aa9.54□□□□□ -0.88
CPSF1-214ENST00000622776 LCE3BQ5TA77 95 aa9.52□□□□□ -0.89
CPSF1-214ENST00000622776 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
CPSF1-214ENST00000622776 MP68P56378 58 aa9.49□□□□□ -0.89
CPSF1-214ENST00000622776 KRTAP10-12P60413 245 aa9.48□□□□□ -0.89
CPSF1-214ENST00000622776 OCR1Q9BZK8 76 aa9.44□□□□□ -0.9
CPSF1-214ENST00000622776 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
CPSF1-214ENST00000622776 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
CPSF1-214ENST00000622776 H3BPC8 53 aa9.29□□□□□ -0.92
CPSF1-214ENST00000622776 MT-ATP8P03928 68 aa9.25□□□□□ -0.93
CPSF1-214ENST00000622776 GPR98Q8WXG9 6306 aa9.25□□□□□ -0.93
CPSF1-214ENST00000622776 DSTQ03001 7570 aaKnown RBP9.18□□□□□ -0.94
CPSF1-214ENST00000622776 TRAV7A0A075B6U4 112 aa9.17□□□□□ -0.94
CPSF1-214ENST00000622776 K7ERU9 68 aa9.16□□□□□ -0.94
CPSF1-214ENST00000622776 J3QR89 54 aa9.15□□□□□ -0.94
CPSF1-214ENST00000622776 ACYP2P14621 99 aa9.08□□□□□ -0.96
CPSF1-214ENST00000622776 SCGB1A1P11684 91 aa9.06□□□□□ -0.96
CPSF1-214ENST00000622776 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
CPSF1-214ENST00000622776 LCE5AQ5TCM9 118 aa9□□□□□ -0.97
CPSF1-214ENST00000622776 KRTAP4-9Q9BYQ8 210 aa8.99□□□□□ -0.97
CPSF1-214ENST00000622776 KRTAP19-7Q3SYF9 63 aa8.94□□□□□ -0.98
CPSF1-214ENST00000622776 CHKB-CPT1BH3BT56 60 aa8.9□□□□□ -0.98
CPSF1-214ENST00000622776 KRTAP19-3Q7Z4W3 81 aa8.9□□□□□ -0.98
CPSF1-214ENST00000622776 MT1EP04732 61 aa8.89□□□□□ -0.99
CPSF1-214ENST00000622776 CAMK2N1Q7Z7J9 78 aa8.89□□□□□ -0.99
CPSF1-214ENST00000622776 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
CPSF1-214ENST00000622776 PCP4P48539 62 aa8.79□□□□□ -1
CPSF1-214ENST00000622776 LCE1DQ5T752 114 aa8.72□□□□□ -1.01
CPSF1-214ENST00000622776 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
CPSF1-214ENST00000622776 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
CPSF1-214ENST00000622776 MT1GP13640 62 aa8.65□□□□□ -1.02
CPSF1-214ENST00000622776 HMCN1Q96RW7 5635 aa8.62□□□□□ -1.03
CPSF1-214ENST00000622776 A0A0D9SG42 100 aa8.61□□□□□ -1.03
CPSF1-214ENST00000622776 KRTAP19-5Q3LI72 72 aa8.61□□□□□ -1.03
CPSF1-214ENST00000622776 LCE4AQ5TA78 99 aa8.6□□□□□ -1.03
CPSF1-214ENST00000622776 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
CPSF1-214ENST00000622776 MT4P47944 62 aa8.57□□□□□ -1.04
CPSF1-214ENST00000622776 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
CPSF1-214ENST00000622776 SPANXA2-OT1Q8N9U9 137 aa8.55□□□□□ -1.04
CPSF1-214ENST00000622776 AHNAK2Q8IVF2 5795 aa8.5□□□□□ -1.05
CPSF1-214ENST00000622776 MT1MQ8N339 61 aa8.5□□□□□ -1.05
CPSF1-214ENST00000622776 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
CPSF1-214ENST00000622776 MT1LQ93083 61 aa8.42□□□□□ -1.06
CPSF1-214ENST00000622776 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
CPSF1-214ENST00000622776 ANAPC13Q9BS18 74 aa8.39□□□□□ -1.07
CPSF1-214ENST00000622776 SEC61GP60059 68 aa8.38□□□□□ -1.07
CPSF1-214ENST00000622776 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
CPSF1-214ENST00000622776 KRTAP5-4Q6L8H1 288 aa8.36□□□□□ -1.07
CPSF1-214ENST00000622776 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
CPSF1-214ENST00000622776 COA5Q86WW8 74 aa8.35□□□□□ -1.07
CPSF1-214ENST00000622776 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
CPSF1-214ENST00000622776 KRTAP5-10Q6L8G5 202 aa8.33□□□□□ -1.08
CPSF1-214ENST00000622776 COX7CP15954 63 aa8.32□□□□□ -1.08
CPSF1-214ENST00000622776 KRTAP4-3Q9BYR4 195 aa8.32□□□□□ -1.08
CPSF1-214ENST00000622776 SVIPQ8NHG7 77 aa8.3□□□□□ -1.08
CPSF1-214ENST00000622776 A0A1B0GU33 70 aa8.29□□□□□ -1.08
CPSF1-214ENST00000622776 KRTAP4-6Q9BYQ5 205 aa8.29□□□□□ -1.08
CPSF1-214ENST00000622776 CCDC179H3BU77 68 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms