RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 KRTAP4-6Q9BYQ5 205 aa8.86□□□□□ -0.99
CIRBP-245ENST00000621399 MT1FP04733 61 aa8.84□□□□□ -0.99
CIRBP-245ENST00000621399 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
CIRBP-245ENST00000621399 LCA10Q71F78 164 aa8.84□□□□□ -0.99
CIRBP-245ENST00000621399 A8MUN3 132 aa8.8□□□□□ -1
CIRBP-245ENST00000621399 CSAG1Q6PB30 78 aa8.8□□□□□ -1
CIRBP-245ENST00000621399 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
CIRBP-245ENST00000621399 NDUFC1O43677 76 aa8.69□□□□□ -1.02
CIRBP-245ENST00000621399 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
CIRBP-245ENST00000621399 SNURFQ9Y675 71 aa8.69□□□□□ -1.02
CIRBP-245ENST00000621399 C20orf197Q8N268 126 aa8.67□□□□□ -1.02
CIRBP-245ENST00000621399 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
CIRBP-245ENST00000621399 USH2AO75445 5202 aa8.66□□□□□ -1.02
CIRBP-245ENST00000621399 KRTAP9-7A8MTY7 169 aa8.62□□□□□ -1.03
CIRBP-245ENST00000621399 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
CIRBP-245ENST00000621399 COX7CP15954 63 aa8.57□□□□□ -1.04
CIRBP-245ENST00000621399 ACYP2P14621 99 aa8.56□□□□□ -1.04
CIRBP-245ENST00000621399 SSPOA2VEC9 5147 aa8.53□□□□□ -1.04
CIRBP-245ENST00000621399 SPANXA2-OT1Q8N9U9 137 aa8.51□□□□□ -1.05
CIRBP-245ENST00000621399 H0YAA0 97 aa8.48□□□□□ -1.05
CIRBP-245ENST00000621399 ANAPC13Q9BS18 74 aa8.48□□□□□ -1.05
CIRBP-245ENST00000621399 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
CIRBP-245ENST00000621399 CHKB-CPT1BH3BT56 60 aa8.42□□□□□ -1.06
CIRBP-245ENST00000621399 FCGBPQ9Y6R7 5405 aaPredicted RBP8.42□□□□□ -1.06
CIRBP-245ENST00000621399 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
CIRBP-245ENST00000621399 SPTSSBQ8NFR3 76 aa8.39□□□□□ -1.07
CIRBP-245ENST00000621399 CRIPTQ9P021 101 aa8.39□□□□□ -1.07
CIRBP-245ENST00000621399 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
CIRBP-245ENST00000621399 CYSTM1Q9H1C7 97 aa8.36□□□□□ -1.07
CIRBP-245ENST00000621399 H7BZZ5 65 aa8.35□□□□□ -1.07
CIRBP-245ENST00000621399 CCDC179H3BU77 68 aa8.29□□□□□ -1.08
CIRBP-245ENST00000621399 P0C880 135 aa8.27□□□□□ -1.09
CIRBP-245ENST00000621399 COA5Q86WW8 74 aa8.26□□□□□ -1.09
CIRBP-245ENST00000621399 KRTAP19-8Q3LI54 63 aa8.25□□□□□ -1.09
CIRBP-245ENST00000621399 Q5VV11 94 aa8.25□□□□□ -1.09
CIRBP-245ENST00000621399 MACF1Q9UPN3 7388 aaKnown RBP8.21□□□□□ -1.1
CIRBP-245ENST00000621399 MT1BP07438 61 aa8.2□□□□□ -1.1
CIRBP-245ENST00000621399 KRTAP19-6Q3LI70 58 aa8.2□□□□□ -1.1
CIRBP-245ENST00000621399 R4GN34 69 aa8.19□□□□□ -1.1
CIRBP-245ENST00000621399 SYNE2Q8WXH0 6885 aaKnown RBP8.18□□□□□ -1.1
CIRBP-245ENST00000621399 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
CIRBP-245ENST00000621399 M0QZ58 72 aa8.14□□□□□ -1.11
CIRBP-245ENST00000621399 ATP5EP56381 51 aaPredicted RBP8.06□□□□□ -1.12
CIRBP-245ENST00000621399 LINC01554Q52M75 96 aa8.02□□□□□ -1.13
CIRBP-245ENST00000621399 SEC61GP60059 68 aa8.01□□□□□ -1.13
CIRBP-245ENST00000621399 A6NN06 94 aa8□□□□□ -1.13
CIRBP-245ENST00000621399 TMEM258P61165 79 aa7.99□□□□□ -1.13
CIRBP-245ENST00000621399 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
CIRBP-245ENST00000621399 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
CIRBP-245ENST00000621399 KRTAP10-5P60370 271 aa7.94□□□□□ -1.14
CIRBP-245ENST00000621399 KRTAP6-3Q3LI67 103 aa7.89□□□□□ -1.15
CIRBP-245ENST00000621399 KRTAP4-12Q9BQ66 201 aa7.88□□□□□ -1.15
CIRBP-245ENST00000621399 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
CIRBP-245ENST00000621399 A0A1B0GU69 56 aa7.85□□□□□ -1.15
CIRBP-245ENST00000621399 A0A1B0GU33 70 aa7.83□□□□□ -1.16
CIRBP-245ENST00000621399 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
CIRBP-245ENST00000621399 MT1XP80297 61 aa7.78□□□□□ -1.16
CIRBP-245ENST00000621399 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
CIRBP-245ENST00000621399 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
CIRBP-245ENST00000621399 NEBP20929 6669 aa7.74□□□□□ -1.17
CIRBP-245ENST00000621399 PRR15LQ9BU68 103 aa7.73□□□□□ -1.17
CIRBP-245ENST00000621399 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
CIRBP-245ENST00000621399 A0A0D9SG42 100 aa7.7□□□□□ -1.18
CIRBP-245ENST00000621399 PCP4P48539 62 aa7.69□□□□□ -1.18
CIRBP-245ENST00000621399 KRTAP9-9Q9BYP9 154 aa7.64□□□□□ -1.19
CIRBP-245ENST00000621399 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
CIRBP-245ENST00000621399 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
CIRBP-245ENST00000621399 MUC12Q9UKN1 5478 aa7.61□□□□□ -1.19
CIRBP-245ENST00000621399 SMIM26A0A096LP01 95 aa7.6□□□□□ -1.19
CIRBP-245ENST00000621399 SPINT4Q6UDR6 99 aa7.58□□□□□ -1.2
CIRBP-245ENST00000621399 A8MU10 97 aa7.53□□□□□ -1.2
CIRBP-245ENST00000621399 KRTAP12-1P59990 96 aa7.53□□□□□ -1.2
CIRBP-245ENST00000621399 KRTAP12-2P59991 146 aa7.52□□□□□ -1.21
CIRBP-245ENST00000621399 KRTAP20-1Q3LI63 56 aa7.51□□□□□ -1.21
CIRBP-245ENST00000621399 V9GYY9 64 aa7.5□□□□□ -1.21
CIRBP-245ENST00000621399 KMT2DO14686 5537 aa7.49□□□□□ -1.21
CIRBP-245ENST00000621399 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
CIRBP-245ENST00000621399 UQCR11O14957 56 aa7.47□□□□□ -1.21
CIRBP-245ENST00000621399 Q1T7F1 81 aa7.45□□□□□ -1.22
CIRBP-245ENST00000621399 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
CIRBP-245ENST00000621399 PSPHP1O15172 72 aa7.41□□□□□ -1.22
CIRBP-245ENST00000621399 RPS28P62857 69 aaKnown RBP7.4□□□□□ -1.22
CIRBP-245ENST00000621399 KRTAP10-12P60413 245 aa7.39□□□□□ -1.23
CIRBP-245ENST00000621399 MDN1Q9NU22 5596 aa7.38□□□□□ -1.23
CIRBP-245ENST00000621399 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
CIRBP-245ENST00000621399 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
CIRBP-245ENST00000621399 MIR22HGQ0VDD5 57 aa7.34□□□□□ -1.23
CIRBP-245ENST00000621399 H3BS24 57 aa7.32□□□□□ -1.24
CIRBP-245ENST00000621399 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
CIRBP-245ENST00000621399 SPRR2FQ96RM1 72 aa7.26□□□□□ -1.25
CIRBP-245ENST00000621399 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
CIRBP-245ENST00000621399 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
CIRBP-245ENST00000621399 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
CIRBP-245ENST00000621399 A6NED7 52 aa7.19□□□□□ -1.26
CIRBP-245ENST00000621399 LCE4AQ5TA78 99 aa7.19□□□□□ -1.26
CIRBP-245ENST00000621399 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
CIRBP-245ENST00000621399 KRTAP19-4Q3LI73 84 aa7.16□□□□□ -1.26
CIRBP-245ENST00000621399 K7ERS5 55 aa7.15□□□□□ -1.26
CIRBP-245ENST00000621399 TNP1P09430 55 aa7.09□□□□□ -1.27
CIRBP-245ENST00000621399 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms