RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 RYR2Q92736 4967 aa6.87□□□□□ -1.31
SKP2-209ENST00000620197 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
SKP2-209ENST00000620197 SMR3BP02814 79 aaPredicted RBP6.86□□□□□ -1.31
SKP2-209ENST00000620197 LCE2DQ5TA82 110 aaPredicted RBP6.86□□□□□ -1.31
SKP2-209ENST00000620197 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.31
SKP2-209ENST00000620197 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
SKP2-209ENST00000620197 ROMO1P60602 79 aa6.77□□□□□ -1.33
SKP2-209ENST00000620197 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
SKP2-209ENST00000620197 KRTAP21-3Q3LHN1 58 aa6.72□□□□□ -1.33
SKP2-209ENST00000620197 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
SKP2-209ENST00000620197 KRTAP13-4Q3LI77 160 aa6.7□□□□□ -1.34
SKP2-209ENST00000620197 KMT2CQ8NEZ4 4911 aaKnown RBP6.68□□□□□ -1.34
SKP2-209ENST00000620197 RPL37P61927 97 aaKnown RBP6.67□□□□□ -1.34
SKP2-209ENST00000620197 P0C880 135 aa6.63□□□□□ -1.35
SKP2-209ENST00000620197 K7ERS5 55 aa6.61□□□□□ -1.35
SKP2-209ENST00000620197 XP32Q5T750 250 aa6.61□□□□□ -1.35
SKP2-209ENST00000620197 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
SKP2-209ENST00000620197 RYR1P21817 5038 aa6.57□□□□□ -1.36
SKP2-209ENST00000620197 S4R3F8 94 aa6.55□□□□□ -1.36
SKP2-209ENST00000620197 LPAP08519 4548 aa6.54□□□□□ -1.36
SKP2-209ENST00000620197 A0A0D9SG42 100 aa6.54□□□□□ -1.36
SKP2-209ENST00000620197 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
SKP2-209ENST00000620197 KRTAP17-1Q9BYP8 105 aa6.52□□□□□ -1.36
SKP2-209ENST00000620197 RYR3Q15413 4870 aa6.47□□□□□ -1.37
SKP2-209ENST00000620197 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
SKP2-209ENST00000620197 MT1HL1P0DM35 61 aa6.46□□□□□ -1.37
SKP2-209ENST00000620197 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
SKP2-209ENST00000620197 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.38
SKP2-209ENST00000620197 Q5VSD8 79 aa6.44□□□□□ -1.38
SKP2-209ENST00000620197 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
SKP2-209ENST00000620197 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
SKP2-209ENST00000620197 LRP2P98164 4655 aa6.39□□□□□ -1.39
SKP2-209ENST00000620197 SPINT4Q6UDR6 99 aa6.35□□□□□ -1.39
SKP2-209ENST00000620197 M0QZ58 72 aa6.31□□□□□ -1.4
SKP2-209ENST00000620197 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
SKP2-209ENST00000620197 MUC17Q685J3 4493 aa6.31□□□□□ -1.4
SKP2-209ENST00000620197 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
SKP2-209ENST00000620197 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
SKP2-209ENST00000620197 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
SKP2-209ENST00000620197 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
SKP2-209ENST00000620197 EPPK1P58107 5090 aaKnown RBP6.19□□□□□ -1.42
SKP2-209ENST00000620197 LCE2BO14633 110 aa6.18□□□□□ -1.42
SKP2-209ENST00000620197 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
SKP2-209ENST00000620197 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SKP2-209ENST00000620197 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
SKP2-209ENST00000620197 FLGP20930 4061 aaPredicted RBP6.02□□□□□ -1.45
SKP2-209ENST00000620197 R4GN34 69 aa6□□□□□ -1.45
SKP2-209ENST00000620197 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
SKP2-209ENST00000620197 LUZP6Q538Z0 58 aa5.93□□□□□ -1.46
SKP2-209ENST00000620197 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
SKP2-209ENST00000620197 HERC1Q15751 4861 aa5.86□□□□□ -1.47
SKP2-209ENST00000620197 BIRC6Q9NR09 4857 aa5.86□□□□□ -1.47
SKP2-209ENST00000620197 MUC2Q02817 5179 aa5.86□□□□□ -1.47
SKP2-209ENST00000620197 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
SKP2-209ENST00000620197 HERC2O95714 4834 aa5.78□□□□□ -1.48
SKP2-209ENST00000620197 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
SKP2-209ENST00000620197 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
SKP2-209ENST00000620197 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
SKP2-209ENST00000620197 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
SKP2-209ENST00000620197 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
SKP2-209ENST00000620197 TNP1P09430 55 aa5.55□□□□□ -1.52
SKP2-209ENST00000620197 KRTAP19-1Q8IUB9 90 aa5.54□□□□□ -1.52
SKP2-209ENST00000620197 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
SKP2-209ENST00000620197 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
SKP2-209ENST00000620197 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
SKP2-209ENST00000620197 MT1HP80294 61 aa5.37□□□□□ -1.55
SKP2-209ENST00000620197 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
SKP2-209ENST00000620197 MT1FP04733 61 aa5.33□□□□□ -1.56
SKP2-209ENST00000620197 M0R2T5 61 aa5.33□□□□□ -1.56
SKP2-209ENST00000620197 LCE3AQ5TA76 89 aa5.33□□□□□ -1.56
SKP2-209ENST00000620197 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
SKP2-209ENST00000620197 MT2AP02795 61 aa5.32□□□□□ -1.56
SKP2-209ENST00000620197 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
SKP2-209ENST00000620197 KRTAP10-5P60370 271 aa5.25□□□□□ -1.57
SKP2-209ENST00000620197 MT1BP07438 61 aa5.23□□□□□ -1.57
SKP2-209ENST00000620197 MT1XP80297 61 aa5.22□□□□□ -1.57
SKP2-209ENST00000620197 KRTAP10-10P60014 251 aa5.14□□□□□ -1.59
SKP2-209ENST00000620197 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
SKP2-209ENST00000620197 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
SKP2-209ENST00000620197 PRO2289Q9P1D8 64 aa5.06□□□□□ -1.6
SKP2-209ENST00000620197 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
SKP2-209ENST00000620197 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
SKP2-209ENST00000620197 INE1O15225 51 aa4.98□□□□□ -1.61
SKP2-209ENST00000620197 USH2AO75445 5202 aa4.96□□□□□ -1.62
SKP2-209ENST00000620197 KMT2DO14686 5537 aa4.92□□□□□ -1.62
SKP2-209ENST00000620197 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
SKP2-209ENST00000620197 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
SKP2-209ENST00000620197 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
SKP2-209ENST00000620197 KRTAP9-6A8MVA2 160 aa4.73□□□□□ -1.65
SKP2-209ENST00000620197 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
SKP2-209ENST00000620197 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
SKP2-209ENST00000620197 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
SKP2-209ENST00000620197 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
SKP2-209ENST00000620197 KRTAP4-8A0A0G2JLE6 195 aa4.64□□□□□ -1.67
SKP2-209ENST00000620197 KRTAP4-8Q9BYQ9 185 aa4.64□□□□□ -1.67
SKP2-209ENST00000620197 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
SKP2-209ENST00000620197 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
SKP2-209ENST00000620197 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
SKP2-209ENST00000620197 MT1LQ93083 61 aa4.51□□□□□ -1.69
SKP2-209ENST00000620197 KRTAP9-4Q9BYQ2 154 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 1021.4 ms