RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 Q8N1X5 172 aa4.21□□□□□ -1.74
CHD7-212ENST00000618450 LINC00304Q8N9R0 145 aa4.2□□□□□ -1.74
CHD7-212ENST00000618450 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
CHD7-212ENST00000618450 A0A1B0GVY2 172 aa4.17□□□□□ -1.74
CHD7-212ENST00000618450 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.74
CHD7-212ENST00000618450 RYR3Q15413 4870 aa4.14□□□□□ -1.75
CHD7-212ENST00000618450 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
CHD7-212ENST00000618450 FLG2Q5D862 2391 aaPredicted RBP4.13□□□□□ -1.75
CHD7-212ENST00000618450 KRTAP25-1Q3LHN0 102 aa4.11□□□□□ -1.75
CHD7-212ENST00000618450 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
CHD7-212ENST00000618450 A0A1B0GU33 70 aa4.1□□□□□ -1.75
CHD7-212ENST00000618450 RYR1P21817 5038 aa4.1□□□□□ -1.75
CHD7-212ENST00000618450 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
CHD7-212ENST00000618450 C9orf92A6NGG3 77 aa4.08□□□□□ -1.76
CHD7-212ENST00000618450 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
CHD7-212ENST00000618450 LRP2P98164 4655 aa4.07□□□□□ -1.76
CHD7-212ENST00000618450 KRTAP10-8P60410 259 aa4.06□□□□□ -1.76
CHD7-212ENST00000618450 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
CHD7-212ENST00000618450 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
CHD7-212ENST00000618450 SMR3BP02814 79 aaPredicted RBP4.02□□□□□ -1.77
CHD7-212ENST00000618450 ROMO1P60602 79 aa4.02□□□□□ -1.77
CHD7-212ENST00000618450 P0C880 135 aa4□□□□□ -1.77
CHD7-212ENST00000618450 TPRXLQ17RH7 258 aa3.99□□□□□ -1.77
CHD7-212ENST00000618450 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
CHD7-212ENST00000618450 XP32Q5T750 250 aa3.96□□□□□ -1.78
CHD7-212ENST00000618450 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
CHD7-212ENST00000618450 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
CHD7-212ENST00000618450 KRTAP21-3Q3LHN1 58 aa3.94□□□□□ -1.78
CHD7-212ENST00000618450 EPPK1P58107 5090 aaKnown RBP3.93□□□□□ -1.78
CHD7-212ENST00000618450 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
CHD7-212ENST00000618450 CRIPTQ9P021 101 aa3.91□□□□□ -1.78
CHD7-212ENST00000618450 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
CHD7-212ENST00000618450 H3BS24 57 aa3.91□□□□□ -1.78
CHD7-212ENST00000618450 KRTAP12-1P59990 96 aa3.9□□□□□ -1.78
CHD7-212ENST00000618450 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
CHD7-212ENST00000618450 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
CHD7-212ENST00000618450 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
CHD7-212ENST00000618450 FLGP20930 4061 aaPredicted RBP3.87□□□□□ -1.79
CHD7-212ENST00000618450 S4R3F8 94 aa3.87□□□□□ -1.79
CHD7-212ENST00000618450 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
CHD7-212ENST00000618450 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
CHD7-212ENST00000618450 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
CHD7-212ENST00000618450 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
CHD7-212ENST00000618450 A0A0D9SG42 100 aa3.8□□□□□ -1.8
CHD7-212ENST00000618450 K7ERS5 55 aa3.79□□□□□ -1.8
CHD7-212ENST00000618450 DMBT1Q9UGM3 2413 aaPredicted RBP3.79□□□□□ -1.8
CHD7-212ENST00000618450 Q5VSD8 79 aa3.78□□□□□ -1.8
CHD7-212ENST00000618450 MUC2Q02817 5179 aa3.76□□□□□ -1.81
CHD7-212ENST00000618450 M0QZ58 72 aa3.74□□□□□ -1.81
CHD7-212ENST00000618450 KRTAP19-1Q8IUB9 90 aa3.74□□□□□ -1.81
CHD7-212ENST00000618450 PCLOQ9Y6V0 5065 aa3.74□□□□□ -1.81
CHD7-212ENST00000618450 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
CHD7-212ENST00000618450 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
CHD7-212ENST00000618450 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
CHD7-212ENST00000618450 BIRC6Q9NR09 4857 aa3.7□□□□□ -1.82
CHD7-212ENST00000618450 HERC1Q15751 4861 aa3.67□□□□□ -1.82
CHD7-212ENST00000618450 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
CHD7-212ENST00000618450 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
CHD7-212ENST00000618450 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
CHD7-212ENST00000618450 HERC2O95714 4834 aa3.62□□□□□ -1.83
CHD7-212ENST00000618450 LCE3BQ5TA77 95 aa3.62□□□□□ -1.83
CHD7-212ENST00000618450 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
CHD7-212ENST00000618450 HMCN2Q8NDA2 5059 aa3.55□□□□□ -1.84
CHD7-212ENST00000618450 FAT4Q6V0I7 4981 aa3.53□□□□□ -1.84
CHD7-212ENST00000618450 R4GN34 69 aa3.52□□□□□ -1.85
CHD7-212ENST00000618450 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
CHD7-212ENST00000618450 PLAC4Q8WY50 150 aa3.5□□□□□ -1.85
CHD7-212ENST00000618450 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
CHD7-212ENST00000618450 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
CHD7-212ENST00000618450 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.86
CHD7-212ENST00000618450 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
CHD7-212ENST00000618450 SEC61BP60468 96 aaKnown RBP3.44□□□□□ -1.86
CHD7-212ENST00000618450 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
CHD7-212ENST00000618450 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
CHD7-212ENST00000618450 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
CHD7-212ENST00000618450 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
CHD7-212ENST00000618450 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
CHD7-212ENST00000618450 RNF213Q63HN8 5207 aa3.34□□□□□ -1.88
CHD7-212ENST00000618450 KRTAP9-7A8MTY7 169 aa3.31□□□□□ -1.88
CHD7-212ENST00000618450 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
CHD7-212ENST00000618450 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
CHD7-212ENST00000618450 TNP1P09430 55 aa3.26□□□□□ -1.89
CHD7-212ENST00000618450 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
CHD7-212ENST00000618450 MT1HP80294 61 aa3.24□□□□□ -1.89
CHD7-212ENST00000618450 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
CHD7-212ENST00000618450 MT1FP04733 61 aa3.23□□□□□ -1.89
CHD7-212ENST00000618450 KRTAP9-3Q9BYQ3 159 aa3.22□□□□□ -1.89
CHD7-212ENST00000618450 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
CHD7-212ENST00000618450 MT2AP02795 61 aa3.21□□□□□ -1.9
CHD7-212ENST00000618450 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
CHD7-212ENST00000618450 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
CHD7-212ENST00000618450 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
CHD7-212ENST00000618450 MT1BP07438 61 aa3.19□□□□□ -1.9
CHD7-212ENST00000618450 MT1XP80297 61 aa3.19□□□□□ -1.9
CHD7-212ENST00000618450 LUZP6Q538Z0 58 aa3.17□□□□□ -1.9
CHD7-212ENST00000618450 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
CHD7-212ENST00000618450 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
CHD7-212ENST00000618450 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
CHD7-212ENST00000618450 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
CHD7-212ENST00000618450 KMT2DO14686 5537 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms