RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 C20orf166-AS1Q96NR2 134 aa7.03□□□□□ -1.28
CLTCL1-210ENST00000617926 PRAC1Q96KF2 57 aa7.02□□□□□ -1.29
CLTCL1-210ENST00000617926 ADM2Q7Z4H4 148 aa6.99□□□□□ -1.29
CLTCL1-210ENST00000617926 J3QL48 77 aa6.96□□□□□ -1.29
CLTCL1-210ENST00000617926 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
CLTCL1-210ENST00000617926 TNXBP22105 4242 aa6.95□□□□□ -1.3
CLTCL1-210ENST00000617926 KRTAP3-1Q9BYR8 98 aa6.93□□□□□ -1.3
CLTCL1-210ENST00000617926 C9orf92A6NGG3 77 aa6.92□□□□□ -1.3
CLTCL1-210ENST00000617926 H0YAA0 97 aa6.9□□□□□ -1.31
CLTCL1-210ENST00000617926 LINC01554Q52M75 96 aa6.86□□□□□ -1.31
CLTCL1-210ENST00000617926 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
CLTCL1-210ENST00000617926 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
CLTCL1-210ENST00000617926 A0A1B0GU33 70 aa6.84□□□□□ -1.32
CLTCL1-210ENST00000617926 COX6B2Q6YFQ2 88 aa6.83□□□□□ -1.32
CLTCL1-210ENST00000617926 CSAG1Q6PB30 78 aa6.81□□□□□ -1.32
CLTCL1-210ENST00000617926 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
CLTCL1-210ENST00000617926 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
CLTCL1-210ENST00000617926 LRP2P98164 4655 aa6.67□□□□□ -1.34
CLTCL1-210ENST00000617926 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
CLTCL1-210ENST00000617926 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.34
CLTCL1-210ENST00000617926 K7ERS5 55 aa6.64□□□□□ -1.35
CLTCL1-210ENST00000617926 LPAP08519 4548 aa6.63□□□□□ -1.35
CLTCL1-210ENST00000617926 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
CLTCL1-210ENST00000617926 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
CLTCL1-210ENST00000617926 XP32Q5T750 250 aa6.58□□□□□ -1.36
CLTCL1-210ENST00000617926 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
CLTCL1-210ENST00000617926 S4R3F8 94 aa6.56□□□□□ -1.36
CLTCL1-210ENST00000617926 KRTAP13-4Q3LI77 160 aa6.55□□□□□ -1.36
CLTCL1-210ENST00000617926 ROMO1P60602 79 aa6.53□□□□□ -1.36
CLTCL1-210ENST00000617926 RNF213Q63HN8 5207 aa6.46□□□□□ -1.37
CLTCL1-210ENST00000617926 P0C880 135 aa6.44□□□□□ -1.38
CLTCL1-210ENST00000617926 A0A0D9SG42 100 aa6.42□□□□□ -1.38
CLTCL1-210ENST00000617926 CRIPTQ9P021 101 aa6.42□□□□□ -1.38
CLTCL1-210ENST00000617926 TPRXLQ17RH7 258 aa6.41□□□□□ -1.38
CLTCL1-210ENST00000617926 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CLTCL1-210ENST00000617926 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
CLTCL1-210ENST00000617926 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
CLTCL1-210ENST00000617926 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
CLTCL1-210ENST00000617926 H3BS24 57 aa6.3□□□□□ -1.4
CLTCL1-210ENST00000617926 M0QZ58 72 aa6.3□□□□□ -1.4
CLTCL1-210ENST00000617926 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
CLTCL1-210ENST00000617926 SPINT4Q6UDR6 99 aa6.2□□□□□ -1.42
CLTCL1-210ENST00000617926 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
CLTCL1-210ENST00000617926 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
CLTCL1-210ENST00000617926 FAT4Q6V0I7 4981 aa6.15□□□□□ -1.42
CLTCL1-210ENST00000617926 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
CLTCL1-210ENST00000617926 R4GN34 69 aa6.05□□□□□ -1.44
CLTCL1-210ENST00000617926 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
CLTCL1-210ENST00000617926 KRTAP19-2Q3LHN2 52 aa6.01□□□□□ -1.45
CLTCL1-210ENST00000617926 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
CLTCL1-210ENST00000617926 LORP23490 312 aaPredicted RBP5.97□□□□□ -1.45
CLTCL1-210ENST00000617926 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
CLTCL1-210ENST00000617926 MT1HP80294 61 aa5.89□□□□□ -1.47
CLTCL1-210ENST00000617926 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
CLTCL1-210ENST00000617926 PP632Q6XCG6 107 aa5.79□□□□□ -1.48
CLTCL1-210ENST00000617926 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
CLTCL1-210ENST00000617926 M0R2T5 61 aa5.74□□□□□ -1.49
CLTCL1-210ENST00000617926 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
CLTCL1-210ENST00000617926 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
CLTCL1-210ENST00000617926 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
CLTCL1-210ENST00000617926 LCE2DQ5TA82 110 aaPredicted RBP5.63□□□□□ -1.51
CLTCL1-210ENST00000617926 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
CLTCL1-210ENST00000617926 TNP1P09430 55 aa5.58□□□□□ -1.52
CLTCL1-210ENST00000617926 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
CLTCL1-210ENST00000617926 MT2AP02795 61 aa5.53□□□□□ -1.52
CLTCL1-210ENST00000617926 SPRR2GQ9BYE4 73 aa5.51□□□□□ -1.53
CLTCL1-210ENST00000617926 MT1FP04733 61 aa5.5□□□□□ -1.53
CLTCL1-210ENST00000617926 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
CLTCL1-210ENST00000617926 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
CLTCL1-210ENST00000617926 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
CLTCL1-210ENST00000617926 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
CLTCL1-210ENST00000617926 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
CLTCL1-210ENST00000617926 KRTAP10-10P60014 251 aa5.43□□□□□ -1.54
CLTCL1-210ENST00000617926 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
CLTCL1-210ENST00000617926 USH2AO75445 5202 aa5.38□□□□□ -1.55
CLTCL1-210ENST00000617926 LCE2BO14633 110 aa5.37□□□□□ -1.55
CLTCL1-210ENST00000617926 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
CLTCL1-210ENST00000617926 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
CLTCL1-210ENST00000617926 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
CLTCL1-210ENST00000617926 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
CLTCL1-210ENST00000617926 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
CLTCL1-210ENST00000617926 MT1BP07438 61 aa5.17□□□□□ -1.58
CLTCL1-210ENST00000617926 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
CLTCL1-210ENST00000617926 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
CLTCL1-210ENST00000617926 MT1XP80297 61 aa5.14□□□□□ -1.59
CLTCL1-210ENST00000617926 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
CLTCL1-210ENST00000617926 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
CLTCL1-210ENST00000617926 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
CLTCL1-210ENST00000617926 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
CLTCL1-210ENST00000617926 MACF1Q9UPN3 7388 aaKnown RBP4.98□□□□□ -1.61
CLTCL1-210ENST00000617926 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.61
CLTCL1-210ENST00000617926 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
CLTCL1-210ENST00000617926 PRO2289Q9P1D8 64 aa4.92□□□□□ -1.62
CLTCL1-210ENST00000617926 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.63
CLTCL1-210ENST00000617926 INE1O15225 51 aa4.86□□□□□ -1.63
CLTCL1-210ENST00000617926 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
CLTCL1-210ENST00000617926 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
CLTCL1-210ENST00000617926 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
CLTCL1-210ENST00000617926 KMT2DO14686 5537 aa4.71□□□□□ -1.66
CLTCL1-210ENST00000617926 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms