RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
RABGAP1-213ENST00000616002 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
RABGAP1-213ENST00000616002 IGLV7-43P04211 117 aa6.35□□□□□ -1.39
RABGAP1-213ENST00000616002 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
RABGAP1-213ENST00000616002 SPATA8Q6RVD6 105 aa6.34□□□□□ -1.39
RABGAP1-213ENST00000616002 IGKV2-30P06310 120 aa6.32□□□□□ -1.4
RABGAP1-213ENST00000616002 LINC00313P59037 77 aa6.32□□□□□ -1.4
RABGAP1-213ENST00000616002 A0A1B0GU69 56 aa6.29□□□□□ -1.4
RABGAP1-213ENST00000616002 ANAPC11Q9NYG5 84 aa6.29□□□□□ -1.4
RABGAP1-213ENST00000616002 UQCR11O14957 56 aa6.26□□□□□ -1.41
RABGAP1-213ENST00000616002 KRTAP16-1A8MUX0 517 aa6.24□□□□□ -1.41
RABGAP1-213ENST00000616002 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
RABGAP1-213ENST00000616002 IGKV2D-30A0A075B6S6 120 aa6.2□□□□□ -1.42
RABGAP1-213ENST00000616002 LPAP08519 4548 aa6.2□□□□□ -1.42
RABGAP1-213ENST00000616002 XP32Q5T750 250 aa6.18□□□□□ -1.42
RABGAP1-213ENST00000616002 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
RABGAP1-213ENST00000616002 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
RABGAP1-213ENST00000616002 MUC2Q02817 5179 aa6.14□□□□□ -1.43
RABGAP1-213ENST00000616002 SPINK1P00995 79 aa6.12□□□□□ -1.43
RABGAP1-213ENST00000616002 RPS29P62273 56 aaKnown RBP6.12□□□□□ -1.43
RABGAP1-213ENST00000616002 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
RABGAP1-213ENST00000616002 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
RABGAP1-213ENST00000616002 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
RABGAP1-213ENST00000616002 CAMK2N1Q7Z7J9 78 aa6.09□□□□□ -1.43
RABGAP1-213ENST00000616002 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
RABGAP1-213ENST00000616002 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
RABGAP1-213ENST00000616002 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
RABGAP1-213ENST00000616002 ADM2Q7Z4H4 148 aa6.03□□□□□ -1.44
RABGAP1-213ENST00000616002 TYMSOSQ8TAI1 123 aa6.01□□□□□ -1.45
RABGAP1-213ENST00000616002 LUZP6Q538Z0 58 aa5.97□□□□□ -1.45
RABGAP1-213ENST00000616002 FAT4Q6V0I7 4981 aa5.97□□□□□ -1.45
RABGAP1-213ENST00000616002 A8MUU9 505 aa5.97□□□□□ -1.45
RABGAP1-213ENST00000616002 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
RABGAP1-213ENST00000616002 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
RABGAP1-213ENST00000616002 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
RABGAP1-213ENST00000616002 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
RABGAP1-213ENST00000616002 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
RABGAP1-213ENST00000616002 H0YAA0 97 aa5.92□□□□□ -1.46
RABGAP1-213ENST00000616002 A0A1B0GU33 70 aa5.91□□□□□ -1.46
RABGAP1-213ENST00000616002 K7ERS5 55 aa5.89□□□□□ -1.47
RABGAP1-213ENST00000616002 H1FX-AS1Q4G0G2 97 aa5.89□□□□□ -1.47
RABGAP1-213ENST00000616002 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
RABGAP1-213ENST00000616002 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
RABGAP1-213ENST00000616002 COX6B2Q6YFQ2 88 aa5.81□□□□□ -1.48
RABGAP1-213ENST00000616002 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
RABGAP1-213ENST00000616002 FSIP2Q5CZC0 6907 aa5.75□□□□□ -1.49
RABGAP1-213ENST00000616002 NDUFAF8A1L188 74 aa5.74□□□□□ -1.49
RABGAP1-213ENST00000616002 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
RABGAP1-213ENST00000616002 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
RABGAP1-213ENST00000616002 C9orf92A6NGG3 77 aa5.72□□□□□ -1.49
RABGAP1-213ENST00000616002 ROMO1P60602 79 aa5.72□□□□□ -1.49
RABGAP1-213ENST00000616002 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
RABGAP1-213ENST00000616002 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
RABGAP1-213ENST00000616002 RPL37P61927 97 aaKnown RBP5.67□□□□□ -1.5
RABGAP1-213ENST00000616002 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.5
RABGAP1-213ENST00000616002 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
RABGAP1-213ENST00000616002 MT1HP80294 61 aa5.61□□□□□ -1.51
RABGAP1-213ENST00000616002 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.52
RABGAP1-213ENST00000616002 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
RABGAP1-213ENST00000616002 S4R3F8 94 aa5.55□□□□□ -1.52
RABGAP1-213ENST00000616002 M0R2T5 61 aa5.53□□□□□ -1.52
RABGAP1-213ENST00000616002 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
RABGAP1-213ENST00000616002 LCE3BQ5TA77 95 aa5.51□□□□□ -1.53
RABGAP1-213ENST00000616002 P0C880 135 aa5.48□□□□□ -1.53
RABGAP1-213ENST00000616002 CRIPTQ9P021 101 aa5.46□□□□□ -1.53
RABGAP1-213ENST00000616002 M0QZ58 72 aa5.45□□□□□ -1.54
RABGAP1-213ENST00000616002 A0A0D9SG42 100 aa5.43□□□□□ -1.54
RABGAP1-213ENST00000616002 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
RABGAP1-213ENST00000616002 LCE4AQ5TA78 99 aa5.42□□□□□ -1.54
RABGAP1-213ENST00000616002 SPINT4Q6UDR6 99 aa5.42□□□□□ -1.54
RABGAP1-213ENST00000616002 KRTAP12-1P59990 96 aa5.4□□□□□ -1.55
RABGAP1-213ENST00000616002 KRTAP12-2P59991 146 aa5.38□□□□□ -1.55
RABGAP1-213ENST00000616002 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
RABGAP1-213ENST00000616002 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
RABGAP1-213ENST00000616002 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
RABGAP1-213ENST00000616002 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
RABGAP1-213ENST00000616002 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
RABGAP1-213ENST00000616002 SSPOA2VEC9 5147 aa5.23□□□□□ -1.57
RABGAP1-213ENST00000616002 USH2AO75445 5202 aa5.23□□□□□ -1.57
RABGAP1-213ENST00000616002 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
RABGAP1-213ENST00000616002 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
RABGAP1-213ENST00000616002 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
RABGAP1-213ENST00000616002 MT2AP02795 61 aa5.16□□□□□ -1.58
RABGAP1-213ENST00000616002 LCE1DQ5T752 114 aa5.15□□□□□ -1.59
RABGAP1-213ENST00000616002 R4GN34 69 aa5.13□□□□□ -1.59
RABGAP1-213ENST00000616002 MT1FP04733 61 aa5.12□□□□□ -1.59
RABGAP1-213ENST00000616002 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
RABGAP1-213ENST00000616002 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
RABGAP1-213ENST00000616002 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
RABGAP1-213ENST00000616002 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
RABGAP1-213ENST00000616002 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
RABGAP1-213ENST00000616002 SYNE2Q8WXH0 6885 aaKnown RBP5.05□□□□□ -1.6
RABGAP1-213ENST00000616002 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
RABGAP1-213ENST00000616002 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
RABGAP1-213ENST00000616002 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.62
RABGAP1-213ENST00000616002 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
RABGAP1-213ENST00000616002 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
RABGAP1-213ENST00000616002 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
RABGAP1-213ENST00000616002 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
RABGAP1-213ENST00000616002 TNP1P09430 55 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms