RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
ALMS1-206ENST00000613296 SVEP1Q4LDE5 3571 aa3.19□□□□□ -1.9
ALMS1-206ENST00000613296 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
ALMS1-206ENST00000613296 CSMD2Q7Z408 3487 aa3.17□□□□□ -1.9
ALMS1-206ENST00000613296 AKAP9Q99996 3911 aa3.15□□□□□ -1.91
ALMS1-206ENST00000613296 CUBNO60494 3623 aa3.15□□□□□ -1.91
ALMS1-206ENST00000613296 SPRR2EP22531 72 aa3.14□□□□□ -1.91
ALMS1-206ENST00000613296 SPRR2BP35325 72 aa3.14□□□□□ -1.91
ALMS1-206ENST00000613296 SPRR2AP35326 72 aa3.14□□□□□ -1.91
ALMS1-206ENST00000613296 CSMD3Q7Z407 3707 aa3.13□□□□□ -1.91
ALMS1-206ENST00000613296 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
ALMS1-206ENST00000613296 MT1HP80294 61 aa3.06□□□□□ -1.92
ALMS1-206ENST00000613296 ZNF469Q96JG9 3925 aaPredicted RBP3.06□□□□□ -1.92
ALMS1-206ENST00000613296 KRTAP19-4Q3LI73 84 aa3.06□□□□□ -1.92
ALMS1-206ENST00000613296 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
ALMS1-206ENST00000613296 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
ALMS1-206ENST00000613296 SPRR2DP22532 72 aa3.03□□□□□ -1.92
ALMS1-206ENST00000613296 MT2AP02795 61 aa3.03□□□□□ -1.92
ALMS1-206ENST00000613296 ALMS1Q8TCU4 4167 aa3.01□□□□□ -1.93
ALMS1-206ENST00000613296 MT1FP04733 61 aa2.99□□□□□ -1.93
ALMS1-206ENST00000613296 MT1GP13640 62 aa2.97□□□□□ -1.93
ALMS1-206ENST00000613296 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
ALMS1-206ENST00000613296 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
ALMS1-206ENST00000613296 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
ALMS1-206ENST00000613296 LCE2BO14633 110 aa2.93□□□□□ -1.94
ALMS1-206ENST00000613296 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
ALMS1-206ENST00000613296 DNAH1Q9P2D7 4330 aa2.88□□□□□ -1.95
ALMS1-206ENST00000613296 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
ALMS1-206ENST00000613296 LYSTQ99698 3801 aa2.88□□□□□ -1.95
ALMS1-206ENST00000613296 MT3P25713 68 aa2.85□□□□□ -1.95
ALMS1-206ENST00000613296 MT4P47944 62 aa2.85□□□□□ -1.95
ALMS1-206ENST00000613296 DNAH7Q8WXX0 4024 aa2.84□□□□□ -1.95
ALMS1-206ENST00000613296 CMYA5Q8N3K9 4069 aa2.83□□□□□ -1.96
ALMS1-206ENST00000613296 DNAH3Q8TD57 4116 aa2.82□□□□□ -1.96
ALMS1-206ENST00000613296 KMT2AQ03164 3969 aa2.82□□□□□ -1.96
ALMS1-206ENST00000613296 LCE2CQ5TA81 110 aa2.81□□□□□ -1.96
ALMS1-206ENST00000613296 FRAS1Q86XX4 4008 aa2.8□□□□□ -1.96
ALMS1-206ENST00000613296 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
ALMS1-206ENST00000613296 LCE2DQ5TA82 110 aaPredicted RBP2.77□□□□□ -1.97
ALMS1-206ENST00000613296 ANK2Q01484 3957 aa2.76□□□□□ -1.97
ALMS1-206ENST00000613296 PRM1P04553 51 aa2.76□□□□□ -1.97
ALMS1-206ENST00000613296 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
ALMS1-206ENST00000613296 MT1XP80297 61 aa2.73□□□□□ -1.97
ALMS1-206ENST00000613296 KRTAP4-8A0A0G2JLE6 195 aa2.72□□□□□ -1.97
ALMS1-206ENST00000613296 KRTAP4-8Q9BYQ9 185 aa2.72□□□□□ -1.97
ALMS1-206ENST00000613296 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
ALMS1-206ENST00000613296 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
ALMS1-206ENST00000613296 DNAH6Q9C0G6 4158 aa2.69□□□□□ -1.98
ALMS1-206ENST00000613296 DNAH2Q9P225 4427 aa2.67□□□□□ -1.98
ALMS1-206ENST00000613296 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
ALMS1-206ENST00000613296 HECTD4Q9Y4D8 3996 aa2.66□□□□□ -1.98
ALMS1-206ENST00000613296 KRTAP4-7Q9BYR0 210 aa2.65□□□□□ -1.98
ALMS1-206ENST00000613296 FAT2Q9NYQ8 4349 aa2.65□□□□□ -1.98
ALMS1-206ENST00000613296 DNAH9Q9NYC9 4486 aa2.64□□□□□ -1.99
ALMS1-206ENST00000613296 PRKDCP78527 4128 aaKnown RBP2.63□□□□□ -1.99
ALMS1-206ENST00000613296 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
ALMS1-206ENST00000613296 LOC100996750A0A140TA64 210 aa2.58□□□□□ -2
ALMS1-206ENST00000613296 MT1LQ93083 61 aa2.56□□□□□ -2
ALMS1-206ENST00000613296 LCE5AQ5TCM9 118 aa2.56□□□□□ -2
ALMS1-206ENST00000613296 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
ALMS1-206ENST00000613296 MT1BP07438 61 aa2.53□□□□□ -2
ALMS1-206ENST00000613296 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
ALMS1-206ENST00000613296 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
ALMS1-206ENST00000613296 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
ALMS1-206ENST00000613296 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
ALMS1-206ENST00000613296 LCE1AQ5T7P2 110 aa2.51□□□□□ -2.01
ALMS1-206ENST00000613296 KRTAP17-1Q9BYP8 105 aa2.5□□□□□ -2.01
ALMS1-206ENST00000613296 MT1EP04732 61 aa2.48□□□□□ -2.01
ALMS1-206ENST00000613296 KRTAP4-9Q9BYQ8 210 aa2.48□□□□□ -2.01
ALMS1-206ENST00000613296 MT1MQ8N339 61 aa2.48□□□□□ -2.01
ALMS1-206ENST00000613296 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
ALMS1-206ENST00000613296 KRTAP9-3Q9BYQ3 159 aa2.45□□□□□ -2.02
ALMS1-206ENST00000613296 KRTAP9-8Q9BYQ0 159 aa2.44□□□□□ -2.02
ALMS1-206ENST00000613296 VPS13DQ5THJ4 4388 aa2.43□□□□□ -2.02
ALMS1-206ENST00000613296 KRTAP9-2Q9BYQ4 174 aa2.42□□□□□ -2.02
ALMS1-206ENST00000613296 DNAH10Q8IVF4 4471 aa2.42□□□□□ -2.02
ALMS1-206ENST00000613296 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
ALMS1-206ENST00000613296 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
ALMS1-206ENST00000613296 LRP1Q07954 4544 aaKnown RBP2.41□□□□□ -2.02
ALMS1-206ENST00000613296 STARD9Q9P2P6 4700 aa2.41□□□□□ -2.02
ALMS1-206ENST00000613296 DNAH17Q9UFH2 4485 aa2.4□□□□□ -2.02
ALMS1-206ENST00000613296 PKHD1L1Q86WI1 4243 aa2.39□□□□□ -2.03
ALMS1-206ENST00000613296 DNAH11Q96DT5 4516 aa2.39□□□□□ -2.03
ALMS1-206ENST00000613296 PKHD1P08F94 4074 aa2.38□□□□□ -2.03
ALMS1-206ENST00000613296 KRTAP2-3P0C7H8 128 aa2.35□□□□□ -2.03
ALMS1-206ENST00000613296 KRTAP2-4Q9BYR9 128 aa2.35□□□□□ -2.03
ALMS1-206ENST00000613296 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
ALMS1-206ENST00000613296 DNAH8Q96JB1 4490 aa2.35□□□□□ -2.03
ALMS1-206ENST00000613296 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
ALMS1-206ENST00000613296 MT1AP04731 61 aa2.32□□□□□ -2.04
ALMS1-206ENST00000613296 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
ALMS1-206ENST00000613296 LRP1BQ9NZR2 4599 aa2.32□□□□□ -2.04
ALMS1-206ENST00000613296 KRTAP9-6A0A140TA67 174 aa2.31□□□□□ -2.04
ALMS1-206ENST00000613296 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
ALMS1-206ENST00000613296 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
ALMS1-206ENST00000613296 PKD1P98161 4303 aa2.29□□□□□ -2.04
ALMS1-206ENST00000613296 TNXBP22105 4242 aa2.26□□□□□ -2.05
ALMS1-206ENST00000613296 FAT3Q8TDW7 4589 aa2.25□□□□□ -2.05
ALMS1-206ENST00000613296 FAT1Q14517 4588 aa2.24□□□□□ -2.05
ALMS1-206ENST00000613296 HSPG2P98160 4391 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 265.9 ms