RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 KIAA1109Q2LD37 5005 aa8.98□□□□□ -0.97
CNOT3-208ENST00000613073 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
CNOT3-208ENST00000613073 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
CNOT3-208ENST00000613073 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
CNOT3-208ENST00000613073 MYCBP2O75592 4640 aa8.91□□□□□ -0.98
CNOT3-208ENST00000613073 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
CNOT3-208ENST00000613073 A0A1B0GU33 70 aa8.87□□□□□ -0.99
CNOT3-208ENST00000613073 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
CNOT3-208ENST00000613073 C20orf166-AS1Q96NR2 134 aa8.84□□□□□ -0.99
CNOT3-208ENST00000613073 P0C880 135 aa8.81□□□□□ -1
CNOT3-208ENST00000613073 H1FX-AS1Q4G0G2 97 aa8.78□□□□□ -1
CNOT3-208ENST00000613073 K7ERS5 55 aa8.69□□□□□ -1.02
CNOT3-208ENST00000613073 KRTAP3-1Q9BYR8 98 aa8.69□□□□□ -1.02
CNOT3-208ENST00000613073 MT1HL1P0DM35 61 aa8.68□□□□□ -1.02
CNOT3-208ENST00000613073 SPINT4Q6UDR6 99 aa8.65□□□□□ -1.03
CNOT3-208ENST00000613073 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
CNOT3-208ENST00000613073 A0A0A0MQY5 61 aa8.63□□□□□ -1.03
CNOT3-208ENST00000613073 XP32Q5T750 250 aa8.6□□□□□ -1.03
CNOT3-208ENST00000613073 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
CNOT3-208ENST00000613073 A0A0D9SG42 100 aa8.58□□□□□ -1.04
CNOT3-208ENST00000613073 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
CNOT3-208ENST00000613073 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
CNOT3-208ENST00000613073 C10orf95Q9H7T3 257 aa8.56□□□□□ -1.04
CNOT3-208ENST00000613073 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
CNOT3-208ENST00000613073 NDUFAF8A1L188 74 aa8.51□□□□□ -1.05
CNOT3-208ENST00000613073 LRP2P98164 4655 aa8.5□□□□□ -1.05
CNOT3-208ENST00000613073 LPAP08519 4548 aa8.49□□□□□ -1.05
CNOT3-208ENST00000613073 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
CNOT3-208ENST00000613073 HERC2O95714 4834 aa8.38□□□□□ -1.07
CNOT3-208ENST00000613073 KRTAP10-6P60371 365 aaPredicted RBP8.36□□□□□ -1.07
CNOT3-208ENST00000613073 KRTAP15-1Q3LI76 137 aa8.33□□□□□ -1.08
CNOT3-208ENST00000613073 J3QL48 77 aa8.28□□□□□ -1.08
CNOT3-208ENST00000613073 BIRC6Q9NR09 4857 aa8.26□□□□□ -1.09
CNOT3-208ENST00000613073 KRTAP3-3Q9BYR6 98 aa8.25□□□□□ -1.09
CNOT3-208ENST00000613073 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
CNOT3-208ENST00000613073 S4R3F8 94 aa8.22□□□□□ -1.09
CNOT3-208ENST00000613073 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CNOT3-208ENST00000613073 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
CNOT3-208ENST00000613073 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
CNOT3-208ENST00000613073 MUC17Q685J3 4493 aa8.07□□□□□ -1.12
CNOT3-208ENST00000613073 HERC1Q15751 4861 aa8.05□□□□□ -1.12
CNOT3-208ENST00000613073 KRTAP12-1P59990 96 aa8.05□□□□□ -1.12
CNOT3-208ENST00000613073 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
CNOT3-208ENST00000613073 MUC2Q02817 5179 aa8.02□□□□□ -1.13
CNOT3-208ENST00000613073 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
CNOT3-208ENST00000613073 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
CNOT3-208ENST00000613073 KRTAP19-2Q3LHN2 52 aa7.78□□□□□ -1.16
CNOT3-208ENST00000613073 PLAC4Q8WY50 150 aa7.77□□□□□ -1.17
CNOT3-208ENST00000613073 M0QZ58 72 aa7.75□□□□□ -1.17
CNOT3-208ENST00000613073 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
CNOT3-208ENST00000613073 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.19
CNOT3-208ENST00000613073 R4GN34 69 aa7.64□□□□□ -1.19
CNOT3-208ENST00000613073 FAT4Q6V0I7 4981 aa7.63□□□□□ -1.19
CNOT3-208ENST00000613073 RNF213Q63HN8 5207 aa7.62□□□□□ -1.19
CNOT3-208ENST00000613073 UBR4Q5T4S7 5183 aa7.61□□□□□ -1.19
CNOT3-208ENST00000613073 LCE2CQ5TA81 110 aa7.46□□□□□ -1.21
CNOT3-208ENST00000613073 M0R2T5 61 aa7.35□□□□□ -1.23
CNOT3-208ENST00000613073 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
CNOT3-208ENST00000613073 MT1HP80294 61 aa7.3□□□□□ -1.24
CNOT3-208ENST00000613073 PP632Q6XCG6 107 aa7.27□□□□□ -1.25
CNOT3-208ENST00000613073 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
CNOT3-208ENST00000613073 MT2AP02795 61 aa7.1□□□□□ -1.27
CNOT3-208ENST00000613073 MT1FP04733 61 aa7.1□□□□□ -1.27
CNOT3-208ENST00000613073 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
CNOT3-208ENST00000613073 SPRR2GQ9BYE4 73 aa7.08□□□□□ -1.28
CNOT3-208ENST00000613073 KRTAP9-8Q9BYQ0 159 aa7.08□□□□□ -1.28
CNOT3-208ENST00000613073 TNP1P09430 55 aa7.03□□□□□ -1.28
CNOT3-208ENST00000613073 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
CNOT3-208ENST00000613073 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
CNOT3-208ENST00000613073 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
CNOT3-208ENST00000613073 KRTAP9-3Q9BYQ3 159 aa6.79□□□□□ -1.32
CNOT3-208ENST00000613073 MT1BP07438 61 aa6.77□□□□□ -1.33
CNOT3-208ENST00000613073 KRTAP23-1A1A580 65 aa6.75□□□□□ -1.33
CNOT3-208ENST00000613073 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
CNOT3-208ENST00000613073 LCE3AQ5TA76 89 aa6.67□□□□□ -1.34
CNOT3-208ENST00000613073 USH2AO75445 5202 aa6.66□□□□□ -1.34
CNOT3-208ENST00000613073 KRTAP10-5P60370 271 aa6.65□□□□□ -1.35
CNOT3-208ENST00000613073 MT1XP80297 61 aa6.65□□□□□ -1.35
CNOT3-208ENST00000613073 LCE2BO14633 110 aa6.59□□□□□ -1.35
CNOT3-208ENST00000613073 INE1O15225 51 aa6.58□□□□□ -1.36
CNOT3-208ENST00000613073 KRTAP10-7P60409 375 aaPredicted RBP6.47□□□□□ -1.37
CNOT3-208ENST00000613073 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
CNOT3-208ENST00000613073 KMT2DO14686 5537 aa6.37□□□□□ -1.39
CNOT3-208ENST00000613073 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
CNOT3-208ENST00000613073 FSIP2Q5CZC0 6907 aa6.31□□□□□ -1.4
CNOT3-208ENST00000613073 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
CNOT3-208ENST00000613073 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
CNOT3-208ENST00000613073 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
CNOT3-208ENST00000613073 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
CNOT3-208ENST00000613073 KRTAP19-5Q3LI72 72 aa6.13□□□□□ -1.43
CNOT3-208ENST00000613073 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
CNOT3-208ENST00000613073 KRTAP19-6Q3LI70 58 aa5.97□□□□□ -1.45
CNOT3-208ENST00000613073 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
CNOT3-208ENST00000613073 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
CNOT3-208ENST00000613073 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
CNOT3-208ENST00000613073 FCGBPQ9Y6R7 5405 aaPredicted RBP5.86□□□□□ -1.47
CNOT3-208ENST00000613073 KRTAP9-6A8MVA2 160 aa5.84□□□□□ -1.47
CNOT3-208ENST00000613073 KRTAP4-7Q9BYR0 210 aa5.78□□□□□ -1.48
CNOT3-208ENST00000613073 MT1EP04732 61 aa5.77□□□□□ -1.49
CNOT3-208ENST00000613073 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms